STRINGSTRING
Hoch_5180 Hoch_5180 Hoch_0402 Hoch_0402 Hoch_0403 Hoch_0403 Hoch_4254 Hoch_4254 Hoch_6366 Hoch_6366
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hoch_5180PFAM: band 7 protein; KEGG: scl:sce5384 membrane protease subunit stomatin/prohibitin-like protein. (509 aa)
Hoch_0402PFAM: band 7 protein; SMART: band 7 protein; KEGG: hypothetical protein. (473 aa)
Hoch_0403PFAM: band 7 protein; SMART: band 7 protein; KEGG: flot1b; flotillin 1b; K07192 flotillin. (430 aa)
Hoch_4254PFAM: band 7 protein; KEGG: son:SO_1377 hypothetical protein. (403 aa)
Hoch_6366KEGG: ret:RHE_PF00026 hypothetical protein. (341 aa)
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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