8 items (Paracoccidioides brasiliensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PADG_06623	Uncharacterized protein. (598 aa)
	PADG_07538	Uncharacterized protein. (243 aa)
	PADG_06884	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (560 aa)
	PADG_06160	S1 motif domain-containing protein. (286 aa)
	PADG_05509	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (373 aa)
	PADG_04916	W2 domain-containing protein. (726 aa)
	PADG_03000	Uncharacterized protein. (630 aa)
	PADG_02287	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (477 aa)

Your Current Organism:

Paracoccidioides brasiliensis

NCBI taxonomy Id: 502780
Other names: P. brasiliensis Pb18, Paracoccidioides brasiliensis Pb18

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PADG_02287	PADG_04916	C1G2C1	C1GBB5	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	W2 domain-containing protein.	0.994
PADG_02287	PADG_05509	C1G2C1	C1GE23	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.995
PADG_02287	PADG_06160	C1G2C1	C1GFX4	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	S1 motif domain-containing protein.	0.994
PADG_02287	PADG_06623	C1G2C1	C1GH87	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	Uncharacterized protein.	0.995
PADG_02287	PADG_06884	C1G2C1	C1GHZ8	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.995
PADG_03000	PADG_04916	C1G745	C1GBB5	Uncharacterized protein.	W2 domain-containing protein.	0.945
PADG_03000	PADG_05509	C1G745	C1GE23	Uncharacterized protein.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.954
PADG_03000	PADG_06160	C1G745	C1GFX4	Uncharacterized protein.	S1 motif domain-containing protein.	0.944
PADG_03000	PADG_06623	C1G745	C1GH87	Uncharacterized protein.	Uncharacterized protein.	0.956
PADG_03000	PADG_06884	C1G745	C1GHZ8	Uncharacterized protein.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.953
PADG_04916	PADG_02287	C1GBB5	C1G2C1	W2 domain-containing protein.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.994
PADG_04916	PADG_03000	C1GBB5	C1G745	W2 domain-containing protein.	Uncharacterized protein.	0.945
PADG_04916	PADG_05509	C1GBB5	C1GE23	W2 domain-containing protein.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.999
PADG_04916	PADG_06160	C1GBB5	C1GFX4	W2 domain-containing protein.	S1 motif domain-containing protein.	0.999
PADG_04916	PADG_06623	C1GBB5	C1GH87	W2 domain-containing protein.	Uncharacterized protein.	0.999
PADG_04916	PADG_06884	C1GBB5	C1GHZ8	W2 domain-containing protein.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.999
PADG_04916	PADG_07538	C1GBB5	C1GJV2	W2 domain-containing protein.	Uncharacterized protein.	0.909
PADG_05509	PADG_02287	C1GE23	C1G2C1	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.995
PADG_05509	PADG_03000	C1GE23	C1G745	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	Uncharacterized protein.	0.954
PADG_05509	PADG_04916	C1GE23	C1GBB5	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	W2 domain-containing protein.	0.999