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PADG_02963 PADG_02963 PIM1 PIM1 PADG_03249 PADG_03249 PADG_03519 PADG_03519 PADG_03714 PADG_03714 PADG_03731 PADG_03731 PADG_03802 PADG_03802 PADG_03869 PADG_03869 PADG_03929 PADG_03929 PADG_04186 PADG_04186 PADG_04335 PADG_04335 PADG_04353 PADG_04353 PADG_04363 PADG_04363 PADG_04394 PADG_04394 PADG_04398 PADG_04398 PADG_04403 PADG_04403 PADG_04453 PADG_04453 PADG_04456 PADG_04456 PADG_04834 PADG_04834 PADG_04915 PADG_04915 PADG_04929 PADG_04929 PADG_04950 PADG_04950 PADG_04954 PADG_04954 PADG_04563 PADG_04563 PADG_04605 PADG_04605 PADG_04658 PADG_04658 PADG_04791 PADG_04791 PADG_05098 PADG_05098 PADG_05442 PADG_05442 PADG_05450 PADG_05450 PADG_05597 PADG_05597 PADG_05749 PADG_05749 PADG_05775 PADG_05775 PADG_05798 PADG_05798 PADG_05906 PADG_05906 PADG_05907 PADG_05907 PADG_06001 PADG_06001 PADG_06077 PADG_06077 PADG_06118 PADG_06118 PADG_06124 PADG_06124 PADG_06413 PADG_06413 PADG_06506 PADG_06506 PADG_06636 PADG_06636 PADG_06720 PADG_06720 PADG_06819 PADG_06819 PIF1 PIF1 PADG_07134 PADG_07134 PADG_07140 PADG_07140 PADG_07193 PADG_07193 PADG_07196 PADG_07196 PADG_07267 PADG_07267 PADG_07417 PADG_07417 PADG_07645 PADG_07645 PADG_07797 PADG_07797 PADG_07805 PADG_07805 PADG_07812 PADG_07812 PADG_07962 PADG_07962 PADG_07996 PADG_07996 PADG_07835 PADG_07835 PADG_07901 PADG_07901 PADG_08183 PADG_08183 PADG_08189 PADG_08189 MCM7 MCM7 PADG_08656 PADG_08656 PADG_08606 PADG_08606 PADG_02850 PADG_02850 PADG_01385 PADG_01385 PADG_03794 PADG_03794 PADG_03904 PADG_03904 PADG_05720-2 PADG_05720-2 PADG_12000 PADG_12000 PADG_11788 PADG_11788 PADG_01460-2 PADG_01460-2 PADG_04553 PADG_04553 PADG_00872 PADG_00872 PADG_00873 PADG_00873 PADG_00963 PADG_00963 PADG_01032 PADG_01032 PADG_01056 PADG_01056 PADG_00256 PADG_00256 PADG_00321 PADG_00321 PADG_00397 PADG_00397 PADG_00411 PADG_00411 PADG_00436 PADG_00436 PADG_00482 PADG_00482 PADG_00656 PADG_00656 PADG_00727 PADG_00727 PADG_00736 PADG_00736 PADG_01238 PADG_01238 PADG_01550 PADG_01550 PADG_01656 PADG_01656 PADG_01819 PADG_01819 PADG_01867 PADG_01867 PADG_01904 PADG_01904 PADG_01921 PADG_01921 PADG_01937 PADG_01937 PADG_02002 PADG_02002 PADG_02012 PADG_02012 PADG_03481 PADG_03481 PADG_02408 PADG_02408 PADG_02556 PADG_02556 PADG_02756 PADG_02756 PADG_02781 PADG_02781 PADG_03063 PADG_03063
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PADG_02963HMG box domain-containing protein. (505 aa)
PIM1Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1073 aa)
PADG_03249Zn(2)-C6 fungal-type domain-containing protein. (969 aa)
PADG_03519Zn(2)-C6 fungal-type domain-containing protein. (671 aa)
PADG_03714DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1147 aa)
PADG_03731Zn(2)-C6 fungal-type domain-containing protein. (1005 aa)
PADG_03802Transcription activator of gluconeogenesis PADG_03802; Transcription factor which regulates nonfermentable carbon utilization. Activator of gluconeogenetic genes (By similarity). Belongs to the ERT1/acuK family. (814 aa)
PADG_03869HMG box domain-containing protein. (375 aa)
PADG_03929Zn(2)-C6 fungal-type domain-containing protein. (853 aa)
PADG_04186MADS-box domain-containing protein. (646 aa)
PADG_04335Zn(2)-C6 fungal-type domain-containing protein. (776 aa)
PADG_04353Zn(2)-C6 fungal-type domain-containing protein. (581 aa)
PADG_04363Zn(2)-C6 fungal-type domain-containing protein. (971 aa)
PADG_04394Uncharacterized protein. (244 aa)
PADG_04398Uncharacterized protein. (369 aa)
PADG_04403Fork-head domain-containing protein. (534 aa)
PADG_04453Zn(2)-C6 fungal-type domain-containing protein. (686 aa)
PADG_04456Zn(2)-C6 fungal-type domain-containing protein. (880 aa)
PADG_04834Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (296 aa)
PADG_04915Response regulatory domain-containing protein. (650 aa)
PADG_04929DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (538 aa)
PADG_04950Zn(2)-C6 fungal-type domain-containing protein. (941 aa)
PADG_04954DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (632 aa)
PADG_04563Zn(2)-C6 fungal-type domain-containing protein. (760 aa)
PADG_04605Zn(2)-C6 fungal-type domain-containing protein. (904 aa)
PADG_04658C2H2-type domain-containing protein. (664 aa)
PADG_04791Histone H3-like centromeric protein CSE4. (177 aa)
PADG_05098DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2232 aa)
PADG_05442Zn(2)-C6 fungal-type domain-containing protein. (1005 aa)
PADG_05450DNA helicase; Belongs to the MCM family. (955 aa)
PADG_05597Zn(2)-C6 fungal-type domain-containing protein. (938 aa)
PADG_05749Zn(2)-C6 fungal-type domain-containing protein. (822 aa)
PADG_05775DNA helicase; Belongs to the MCM family. (718 aa)
PADG_05798Uncharacterized protein. (134 aa)
PADG_05906Histone H2A; Belongs to the histone H2A family. (134 aa)
PADG_05907Histone H2B; Belongs to the histone H2B family. (141 aa)
PADG_06001H15 domain-containing protein. (203 aa)
PADG_06077Zn(2)-C6 fungal-type domain-containing protein. (748 aa)
PADG_06118HMG box domain-containing protein. (333 aa)
PADG_06124DNA polymerase. (1705 aa)
PADG_06413Zn(2)-C6 fungal-type domain-containing protein. (691 aa)
PADG_06506Zn(2)-C6 fungal-type domain-containing protein. (814 aa)
PADG_06636Zn(2)-C6 fungal-type domain-containing protein. (721 aa)
PADG_06720Zn(2)-C6 fungal-type domain-containing protein. (740 aa)
PADG_06819HMG box domain-containing protein. (309 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (797 aa)
PADG_07134Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (148 aa)
PADG_07140HMG box domain-containing protein. (333 aa)
PADG_07193Zn(2)-C6 fungal-type domain-containing protein. (742 aa)
PADG_07196Zn(2)-C6 fungal-type domain-containing protein. (852 aa)
PADG_07267Zn(2)-C6 fungal-type domain-containing protein. (648 aa)
PADG_07417Zn(2)-C6 fungal-type domain-containing protein. (769 aa)
PADG_07645Zn(2)-C6 fungal-type domain-containing protein. (750 aa)
PADG_07797Uncharacterized protein. (389 aa)
PADG_07805DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (504 aa)
PADG_07812DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (905 aa)
PADG_07962MADS-box domain-containing protein. (237 aa)
PADG_07996Zn(2)-C6 fungal-type domain-containing protein. (756 aa)
PADG_07835Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (603 aa)
PADG_07901DNA helicase; Belongs to the MCM family. (888 aa)
PADG_08183DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR). (941 aa)
PADG_08189Uncharacterized protein. (1228 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (812 aa)
PADG_08656Zn(2)-C6 fungal-type domain-containing protein. (978 aa)
PADG_08606DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1157 aa)
PADG_02850Zn(2)-C6 fungal-type domain-containing protein. (875 aa)
PADG_01385DNA polymerase. (1978 aa)
PADG_03794DNA helicase; Belongs to the MCM family. (1869 aa)
PADG_03904Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (954 aa)
PADG_05720-2Zn(2)-C6 fungal-type domain-containing protein. (1010 aa)
PADG_12000Fork-head domain-containing protein. (750 aa)
PADG_11788Homeobox domain-containing protein. (572 aa)
PADG_01460-2Zn(2)-C6 fungal-type domain-containing protein. (464 aa)
PADG_04553Zn(2)-C6 fungal-type domain-containing protein. (662 aa)
PADG_00872Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (142 aa)
PADG_00873Histone H3. (136 aa)
PADG_00963Uncharacterized protein. (766 aa)
PADG_01032DNA-binding protein, 42 kDa. (410 aa)
PADG_01056DNA polymerase. (1110 aa)
PADG_00256Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (719 aa)
PADG_00321HSF_DOMAIN domain-containing protein. (659 aa)
PADG_00397NDT80 domain-containing protein. (582 aa)
PADG_00411Zn(2)-C6 fungal-type domain-containing protein. (901 aa)
PADG_00436NDT80 domain-containing protein. (697 aa)
PADG_00482Zn(2)-C6 fungal-type domain-containing protein. (962 aa)
PADG_00656Non-histone chromosomal protein 6. (70 aa)
PADG_00727Zn(2)-C6 fungal-type domain-containing protein. (1128 aa)
PADG_00736Uncharacterized protein. (869 aa)
PADG_01238Homeobox domain-containing protein. (509 aa)
PADG_01550Uncharacterized protein. (1111 aa)
PADG_01656HMG box domain-containing protein. (707 aa)
PADG_01819Zn(2)-C6 fungal-type domain-containing protein. (880 aa)
PADG_01867HMG box domain-containing protein. (328 aa)
PADG_01904DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (348 aa)
PADG_01921Homeobox domain-containing protein. (736 aa)
PADG_01937Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (839 aa)
PADG_02002Homeobox domain-containing protein. (758 aa)
PADG_02012Homeobox domain-containing protein. (533 aa)
PADG_03481DNA helicase; Belongs to the MCM family. (854 aa)
PADG_02408HSF_DOMAIN domain-containing protein. (836 aa)
PADG_02556Zn(2)-C6 fungal-type domain-containing protein. (840 aa)
PADG_02756Zn(2)-C6 fungal-type domain-containing protein. (862 aa)
PADG_02781Zn(2)-C6 fungal-type domain-containing protein. (824 aa)
PADG_03063DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1258 aa)
Your Current Organism:
Paracoccidioides brasiliensis
NCBI taxonomy Id: 502780
Other names: P. brasiliensis Pb18, Paracoccidioides brasiliensis Pb18
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