37 items (Paracoccidioides brasiliensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PADG_05809	Uncharacterized protein. (1548 aa)
	PADG_11825	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (237 aa)
	PADG_11752	ABC transporter domain-containing protein. (457 aa)
	PADG_11784	Uncharacterized protein. (1207 aa)
	PADG_03889	Uncharacterized protein; Belongs to the cytochrome P450 family. (1405 aa)
	PADG_11753	ABC2_membrane domain-containing protein. (145 aa)
	PADG_00995	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PADG_00103	Uncharacterized protein. (1325 aa)
	PADG_00284	Uncharacterized protein. (754 aa)
	PADG_00570	Uncharacterized protein. (1105 aa)
	PADG_02144	Uncharacterized protein. (724 aa)
	PADG_01303	ABC transporter domain-containing protein. (1101 aa)
	PADG_01605	Polyubiquitin. (315 aa)
	PADG_02031	Uncharacterized protein. (825 aa)
	PADG_02474	PRKCSH domain-containing protein. (508 aa)
	PADG_02601	Uncharacterized protein. (738 aa)
	PADG_03069	Uncharacterized protein. (1579 aa)
	PADG_03125	Uncharacterized protein. (1372 aa)
	PADG_03258	Uncharacterized protein. (1281 aa)
	PADG_04083	Eukaryotic translation initiation factor 2 subunit gamma. (520 aa)
	PADG_04210	eIF2B_5 domain-containing protein. (308 aa)
	PADG_04410	Uncharacterized protein. (955 aa)
	PADG_04891	Iron-sulfur clusters transporter atm1, mitochondrial. (734 aa)
	PADG_04567	BZIP domain-containing protein. (256 aa)
	PADG_04697	Uncharacterized protein. (889 aa)
	PADG_04708	Uncharacterized protein. (1109 aa)
	PADG_05168	Uncharacterized protein. (751 aa)
	PADG_05345	Uncharacterized protein. (505 aa)
	PADG_05674	RING-type domain-containing protein. (204 aa)
	PADG_05835	Uncharacterized protein. (1378 aa)
	PADG_05876	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (259 aa)
	PADG_05937	Uncharacterized protein. (764 aa)
	PADG_06160	S1 motif domain-containing protein. (286 aa)
	PADG_06596	Uncharacterized protein. (658 aa)
	PADG_06785	Uncharacterized protein. (894 aa)
	PADG_07398	Uncharacterized protein. (1702 aa)
	PADG_07464	Uncharacterized protein. (1594 aa)

Your Current Organism:

Paracoccidioides brasiliensis

NCBI taxonomy Id: 502780
Other names: P. brasiliensis Pb18, Paracoccidioides brasiliensis Pb18

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PADG_00284	PADG_00995	C1G094	C1FYW9	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.621
PADG_00284	PADG_01605	C1G094	C1G3T9	Uncharacterized protein.	Polyubiquitin.	0.901
PADG_00284	PADG_02474	C1G094	C1G5L9	Uncharacterized protein.	PRKCSH domain-containing protein.	0.916
PADG_00284	PADG_03069	C1G094	C1G7B4	Uncharacterized protein.	Uncharacterized protein.	0.428
PADG_00284	PADG_04567	C1G094	C1GC45	Uncharacterized protein.	BZIP domain-containing protein.	0.621
PADG_00284	PADG_05809	C1G094	C1GEX3	Uncharacterized protein.	Uncharacterized protein.	0.428
PADG_00284	PADG_05876	C1G094	C1GF40	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.937
PADG_00284	PADG_06785	C1G094	C1GHP9	Uncharacterized protein.	Uncharacterized protein.	0.892
PADG_00284	PADG_07398	C1G094	C1GJG2	Uncharacterized protein.	Uncharacterized protein.	0.428
PADG_00284	PADG_11825	C1G094	A0A0A0HS30	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.924
PADG_00995	PADG_00284	C1FYW9	C1G094	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.621
PADG_00995	PADG_01605	C1FYW9	C1G3T9	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.992
PADG_00995	PADG_02474	C1FYW9	C1G5L9	Ubiquitin-40S ribosomal protein S27a.	PRKCSH domain-containing protein.	0.610
PADG_00995	PADG_04083	C1FYW9	C1G9Z7	Ubiquitin-40S ribosomal protein S27a.	Eukaryotic translation initiation factor 2 subunit gamma.	0.862
PADG_00995	PADG_04210	C1FYW9	C1GAC4	Ubiquitin-40S ribosomal protein S27a.	eIF2B_5 domain-containing protein.	0.869
PADG_00995	PADG_04708	C1FYW9	C1GCI6	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.980
PADG_00995	PADG_05674	C1FYW9	C1GEI8	Ubiquitin-40S ribosomal protein S27a.	RING-type domain-containing protein.	0.593
PADG_00995	PADG_05876	C1FYW9	C1GF40	Ubiquitin-40S ribosomal protein S27a.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.568
PADG_00995	PADG_06160	C1FYW9	C1GFX4	Ubiquitin-40S ribosomal protein S27a.	S1 motif domain-containing protein.	0.867
PADG_00995	PADG_11825	C1FYW9	A0A0A0HS30	Ubiquitin-40S ribosomal protein S27a.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.586