Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | LSM3 | A0A0A0A925 | A0A0A0AT66 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM1 | LSM4 | A0A0A0A925 | A0A0A0AYM3 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM1 | LSM5 | A0A0A0A925 | A0A0A0AML1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
| LSM1 | LSM8 | A0A0A0A925 | A0A0A0AFE9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.976 |
| LSM1 | N301_01787 | A0A0A0A925 | A0A0A0A2X9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Protein PAT1 2. | 0.969 |
| LSM1 | N301_02055 | A0A0A0A925 | A0A0A0AXJ4 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | 0.663 |
| LSM1 | N301_02757 | A0A0A0A925 | A0A0A0APW8 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Regulator of nonsense transcripts 1. | 0.548 |
| LSM1 | N301_02937 | A0A0A0A925 | A0A0A0B4Q6 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | M7GpppN-mRNA hydrolase. | 0.951 |
| LSM1 | N301_03532 | A0A0A0A925 | A0A0A0AGX2 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Putative ATP-dependent RNA helicase DDX59. | 0.658 |
| LSM1 | N301_03742 | A0A0A0A925 | A0A0A0A443 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Putative ATP-dependent RNA helicase DDX6. | 0.996 |
| LSM1 | N301_03931 | A0A0A0A925 | A0A0A0AXM8 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like LSm6. | 0.999 |
| LSM1 | N301_05214 | A0A0A0A925 | A0A0A0APV1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Small nuclear ribonucleoprotein G. | 0.605 |
| LSM1 | N301_06246 | A0A0A0A925 | A0A0A0B427 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Protein LSM14 B. | 0.592 |
| LSM1 | N301_06613 | A0A0A0A925 | A0A0A0AQX1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.786 |
| LSM1 | N301_06647 | A0A0A0A925 | A0A0A0APU5 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Diphosphoinositol polyphosphate phosphohydrolase 1. | 0.748 |
| LSM1 | N301_07934 | A0A0A0A925 | A0A0A0ABX1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Regulator of nonsense transcripts 2. | 0.498 |
| LSM1 | N301_08080 | A0A0A0A925 | A0A0A0A2X6 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. | 0.658 |
| LSM1 | N301_09057 | A0A0A0A925 | A0A0A0A6D9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Putative ATP-dependent RNA helicase DDX43. | 0.658 |
| LSM1 | N301_09269 | A0A0A0A925 | A0A099ZXL9 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Putative ATP-dependent RNA helicase DDX46. | 0.658 |
| LSM1 | N301_09484 | A0A0A0A925 | A0A0A0A5N4 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Small nuclear ribonucleoprotein Sm D2. | 0.747 |
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