29 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_02315	Syntaxin-11. (287 aa)
	N301_04441	Alpha-soluble NSF attachment protein. (190 aa)
	N301_15239	Golgi SNAP receptor complex member 1. (233 aa)
	N301_07727	BET1. (110 aa)
	N301_01365	Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family. (304 aa)
	N301_15615	Syntaxin-7; Belongs to the syntaxin family. (257 aa)
	N301_13020	Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
	N301_12247	Syntaxin-8. (211 aa)
	N301_13915	Vesicle-associated membrane protein 3. (55 aa)
	N301_14893	Uncharacterized protein. (142 aa)
	N301_07043	Vesicle transport through interaction with t-SNAREs 1A. (113 aa)
	N301_00835	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family. (156 aa)
	N301_08596	Vesicle transport through interaction with t-SNAREs 1B. (197 aa)
	N301_04532	Syntaxin-17. (301 aa)
	N301_10939	Beta-soluble NSF attachment protein. (262 aa)
	N301_02093	Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
	N301_09552	Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family. (308 aa)
	N301_12036	General vesicular transport factor p115. (939 aa)
	N301_08564	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (209 aa)
	N301_12747	Golgin subfamily A member 2. (986 aa)
	N301_14009	Gamma-soluble NSF attachment protein. (295 aa)
	N301_08308	Synaptosomal-associated protein 29. (206 aa)
	N301_06817	t-SNARE domain-containing protein 1. (185 aa)
	N301_13456	Golgi reassembly-stacking protein 1. (357 aa)
	N301_09658	Vesicle-associated membrane protein 4. (86 aa)
	N301_09697	Syntaxin-6; Belongs to the syntaxin family. (239 aa)
	N301_15195	Golgi SNAP receptor complex member 2. (204 aa)
	N301_11021	Syntaxin-12; Belongs to the syntaxin family. (234 aa)
	N301_06268	Syntaxin-16. (275 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00835	N301_01365	A0A0A0ABW1	A0A0A0A4P4	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family.	0.935
N301_00835	N301_02093	A0A0A0ABW1	A0A0A0AK41	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.	0.996
N301_00835	N301_02315	A0A0A0ABW1	A0A0A0A2W4	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Syntaxin-11.	0.840
N301_00835	N301_04441	A0A0A0ABW1	A0A0A0A3D9	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Alpha-soluble NSF attachment protein.	0.935
N301_00835	N301_04532	A0A0A0ABW1	A0A0A0AHT6	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Syntaxin-17.	0.958
N301_00835	N301_06268	A0A0A0ABW1	A0A0A0B1Q9	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Syntaxin-16.	0.983
N301_00835	N301_06817	A0A0A0ABW1	A0A0A0AS04	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	t-SNARE domain-containing protein 1.	0.969
N301_00835	N301_07043	A0A0A0ABW1	A0A0A0AAI9	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Vesicle transport through interaction with t-SNAREs 1A.	0.995
N301_00835	N301_07727	A0A0A0ABW1	A0A0A0A4A3	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	BET1.	0.998
N301_00835	N301_08308	A0A0A0ABW1	A0A0A0ARY7	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Synaptosomal-associated protein 29.	0.712
N301_00835	N301_08564	A0A0A0ABW1	A0A0A0ANY5	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.516
N301_00835	N301_08596	A0A0A0ABW1	A0A0A0AF16	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Vesicle transport through interaction with t-SNAREs 1B.	0.989
N301_00835	N301_09552	A0A0A0ABW1	A0A0A0AKY5	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family.	0.936
N301_00835	N301_09658	A0A0A0ABW1	A0A0A0AYC8	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Vesicle-associated membrane protein 4.	0.689
N301_00835	N301_09697	A0A0A0ABW1	A0A0A0AYF5	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Syntaxin-6; Belongs to the syntaxin family.	0.993
N301_00835	N301_10939	A0A0A0ABW1	A0A0A0AI06	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Beta-soluble NSF attachment protein.	0.935
N301_00835	N301_11021	A0A0A0ABW1	A0A0A0B1J6	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Syntaxin-12; Belongs to the syntaxin family.	0.982
N301_00835	N301_12036	A0A0A0ABW1	A0A0A0ANS7	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	General vesicular transport factor p115.	0.902
N301_00835	N301_12247	A0A0A0ABW1	A0A0A0A862	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Syntaxin-8.	0.981
N301_00835	N301_12747	A0A0A0ABW1	A0A0A0AP47	Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.	Golgin subfamily A member 2.	0.633