25 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_16333	Synaptotagmin-11. (418 aa)
	N301_07388	Syntaxin-1B. (194 aa)
	N301_08020	Vesicular inhibitory amino acid transporter. (395 aa)
	N301_06763	Complexin-1. (124 aa)
	N301_07496	Synaptobrevin. (110 aa)
	N301_01388	Synaptosomal-associated protein 47. (420 aa)
	N301_16088	Synapsin-3. (245 aa)
	N301_15906	Syntaxin-3. (265 aa)
	N301_07270	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (473 aa)
	N301_16086	Synapsin-3. (313 aa)
	N301_07269	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (97 aa)
	N301_03291	Ras-related protein Rab-3B. (219 aa)
	N301_03526	Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (573 aa)
	N301_15294	Vesicle-associated membrane protein 3. (97 aa)
	N301_10995	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (146 aa)
	N301_01186	Vesicular glutamate transporter 2. (581 aa)
	N301_08262	Syntaxin-2; Belongs to the syntaxin family. (280 aa)
	N301_11596	Syntaxin-19; Belongs to the syntaxin family. (291 aa)
	N301_09195	Protein unc-13 B. (110 aa)
	N301_13902	Syntaxin-1A; Belongs to the syntaxin family. (284 aa)
	N301_14219	Synapsin-2. (420 aa)
	N301_02893	Regulating synaptic membrane exocytosis protein 3. (239 aa)
	N301_00002	Vesicle-associated membrane protein 3. (43 aa)
	N301_15801	Synaptotagmin-1. (424 aa)
	N301_10400	Putative vesicular acetylcholine transporter-A. (269 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00002	N301_01186	A0A0A0B0M4	A0A0A0ALA4	Vesicle-associated membrane protein 3.	Vesicular glutamate transporter 2.	0.483
N301_00002	N301_01388	A0A0A0B0M4	A0A0A0A7Z7	Vesicle-associated membrane protein 3.	Synaptosomal-associated protein 47.	0.794
N301_00002	N301_02893	A0A0A0B0M4	A0A0A0AW44	Vesicle-associated membrane protein 3.	Regulating synaptic membrane exocytosis protein 3.	0.505
N301_00002	N301_03291	A0A0A0B0M4	A0A0A0AGA6	Vesicle-associated membrane protein 3.	Ras-related protein Rab-3B.	0.553
N301_00002	N301_03526	A0A0A0B0M4	A0A0A0AGW7	Vesicle-associated membrane protein 3.	Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.	0.783
N301_00002	N301_06763	A0A0A0B0M4	A0A0A0A248	Vesicle-associated membrane protein 3.	Complexin-1.	0.659
N301_00002	N301_07269	A0A0A0B0M4	A0A0A0ADS2	Vesicle-associated membrane protein 3.	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.	0.783
N301_00002	N301_07270	A0A0A0B0M4	A0A0A0AAP7	Vesicle-associated membrane protein 3.	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.	0.783
N301_00002	N301_07388	A0A0A0B0M4	A0A099ZWW7	Vesicle-associated membrane protein 3.	Syntaxin-1B.	0.761
N301_00002	N301_08020	A0A0A0B0M4	A0A0A0A021	Vesicle-associated membrane protein 3.	Vesicular inhibitory amino acid transporter.	0.566
N301_00002	N301_08262	A0A0A0B0M4	A0A0A0AMS0	Vesicle-associated membrane protein 3.	Syntaxin-2; Belongs to the syntaxin family.	0.761
N301_00002	N301_09195	A0A0A0B0M4	A0A0A0ASW9	Vesicle-associated membrane protein 3.	Protein unc-13 B.	0.561
N301_00002	N301_10400	A0A0A0B0M4	A0A0A0B1N0	Vesicle-associated membrane protein 3.	Putative vesicular acetylcholine transporter-A.	0.511
N301_00002	N301_10995	A0A0A0B0M4	A0A0A0AJX2	Vesicle-associated membrane protein 3.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.794
N301_00002	N301_11596	A0A0A0B0M4	A0A0A0ASR4	Vesicle-associated membrane protein 3.	Syntaxin-19; Belongs to the syntaxin family.	0.753
N301_00002	N301_13902	A0A0A0B0M4	A0A0A0ATI4	Vesicle-associated membrane protein 3.	Syntaxin-1A; Belongs to the syntaxin family.	0.761
N301_00002	N301_14219	A0A0A0B0M4	A0A0A0AVR0	Vesicle-associated membrane protein 3.	Synapsin-2.	0.539
N301_00002	N301_15801	A0A0A0B0M4	A0A0A0B1G8	Vesicle-associated membrane protein 3.	Synaptotagmin-1.	0.490
N301_00002	N301_15906	A0A0A0B0M4	A0A0A0AA59	Vesicle-associated membrane protein 3.	Syntaxin-3.	0.761
N301_00002	N301_16086	A0A0A0B0M4	A0A0A0ACT3	Vesicle-associated membrane protein 3.	Synapsin-3.	0.539