6 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_08597	Arginase. (278 aa)
	N301_12345	Argininosuccinate lyase. (450 aa)
	N301_01988	Uncharacterized protein. (1507 aa)
	N301_04907	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (354 aa)
	N301_12705	Argininosuccinate synthase. (411 aa)
	N301_09451	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (439 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_01988	N301_04907	A0A0A0ALM9	A0A0A0ANE4	Uncharacterized protein.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.993
N301_01988	N301_08597	A0A0A0ALM9	A0A0A0ABY1	Uncharacterized protein.	Arginase.	0.728
N301_01988	N301_09451	A0A0A0ALM9	A0A0A0B107	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.782
N301_01988	N301_12345	A0A0A0ALM9	A0A0A0AIV5	Uncharacterized protein.	Argininosuccinate lyase.	0.825
N301_01988	N301_12705	A0A0A0ALM9	A0A0A0AQ86	Uncharacterized protein.	Argininosuccinate synthase.	0.995
N301_04907	N301_01988	A0A0A0ANE4	A0A0A0ALM9	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	Uncharacterized protein.	0.993
N301_04907	N301_08597	A0A0A0ANE4	A0A0A0ABY1	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	Arginase.	0.940
N301_04907	N301_09451	A0A0A0ANE4	A0A0A0B107	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.973
N301_04907	N301_12345	A0A0A0ANE4	A0A0A0AIV5	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	Argininosuccinate lyase.	0.701
N301_04907	N301_12705	A0A0A0ANE4	A0A0A0AQ86	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	Argininosuccinate synthase.	0.996
N301_08597	N301_01988	A0A0A0ABY1	A0A0A0ALM9	Arginase.	Uncharacterized protein.	0.728
N301_08597	N301_04907	A0A0A0ABY1	A0A0A0ANE4	Arginase.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.940
N301_08597	N301_09451	A0A0A0ABY1	A0A0A0B107	Arginase.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.992
N301_08597	N301_12345	A0A0A0ABY1	A0A0A0AIV5	Arginase.	Argininosuccinate lyase.	0.854
N301_08597	N301_12705	A0A0A0ABY1	A0A0A0AQ86	Arginase.	Argininosuccinate synthase.	0.900
N301_09451	N301_01988	A0A0A0B107	A0A0A0ALM9	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.782
N301_09451	N301_04907	A0A0A0B107	A0A0A0ANE4	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.973
N301_09451	N301_08597	A0A0A0B107	A0A0A0ABY1	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Arginase.	0.992
N301_09451	N301_12345	A0A0A0B107	A0A0A0AIV5	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Argininosuccinate lyase.	0.979
N301_09451	N301_12705	A0A0A0B107	A0A0A0AQ86	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Argininosuccinate synthase.	0.990