STRINGSTRING
N301_13408 N301_13408 N301_06435 N301_06435 N301_08682 N301_08682 N301_06437 N301_06437 N301_11950 N301_11950 N301_12231 N301_12231 N301_15262 N301_15262 N301_03254 N301_03254 N301_04217 N301_04217 N301_00815 N301_00815 N301_01587 N301_01587 N301_00810 N301_00810
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_13408tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (477 aa)
N301_06435Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (926 aa)
N301_08682Lysine--tRNA ligase. (545 aa)
N301_06437Bifunctional glutamate/proline--tRNA ligase. (1586 aa)
N301_11950Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (904 aa)
N301_12231Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (1175 aa)
N301_15262Tyrosine--tRNA ligase. (509 aa)
N301_03254HGTP_anticodon domain-containing protein. (234 aa)
N301_04217DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (572 aa)
N301_00815Arginine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (613 aa)
N301_01587tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (505 aa)
N301_00810Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (810 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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