STRINGSTRING
N301_10559 N301_10559 N301_13027 N301_13027 N301_12856 N301_12856 N301_13863 N301_13863 N301_08407 N301_08407 N301_15580 N301_15580 N301_10060 N301_10060 N301_03093 N301_03093 N301_10115 N301_10115 N301_08682 N301_08682 N301_06435 N301_06435 N301_13408 N301_13408 N301_01655 N301_01655 N301_11622 N301_11622 N301_09463 N301_09463 N301_01334 N301_01334 AARS AARS N301_03677 N301_03677 N301_00810 N301_00810 N301_03996 N301_03996 N301_08363 N301_08363 N301_09185 N301_09185 N301_00441 N301_00441 N301_05335 N301_05335 N301_02442 N301_02442 N301_06014 N301_06014 N301_01296 N301_01296 N301_00342 N301_00342 N301_06029 N301_06029 N301_16002 N301_16002 N301_11597 N301_11597 N301_02099 N301_02099 N301_01513 N301_01513 N301_08268 N301_08268 N301_01548 N301_01548 N301_07598 N301_07598 N301_09346 N301_09346 N301_02198 N301_02198 N301_01151 N301_01151 N301_14244 N301_14244 N301_04143 N301_04143 N301_12572 N301_12572 N301_12602 N301_12602 N301_01934 N301_01934 N301_00501 N301_00501 N301_00397 N301_00397 N301_08582 N301_08582 N301_10543 N301_10543 N301_15262 N301_15262
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_10559THUMP domain-containing protein 3. (421 aa)
N301_13027YrdC-like domain-containing protein. (799 aa)
N301_12856YrdC-like domain-containing protein. (147 aa)
N301_13863tRNA methyltransferase 10 B. (124 aa)
N301_08407RF_PROK_I domain-containing protein. (124 aa)
N301_15580tRNA (Guanine(10)-N2)-methyltransferase. (435 aa)
N301_10060Elongator complex protein 3. (539 aa)
N301_03093Lupus La protein. (407 aa)
N301_10115D-aminoacyl-tRNA deacylase. (193 aa)
N301_08682Lysine--tRNA ligase. (545 aa)
N301_06435Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (926 aa)
N301_13408tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (477 aa)
N301_01655Uncharacterized protein C6orf203. (228 aa)
N301_11622Nuclear export mediator factor Nemf. (1057 aa)
N301_09463L-seryl-tRNA(Sec) kinase. (218 aa)
N301_01334DALR anticodon-binding domain-containing protein 3. (383 aa)
AARSAlanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (963 aa)
N301_03677Eukaryotic translation initiation factor 2 subunit 3. (429 aa)
N301_00810Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (810 aa)
N301_03996Cysteine--tRNA ligase, cytoplasmic. (822 aa)
N301_08363Mitochondrial ribonuclease P protein 1. (328 aa)
N301_091853-hydroxyacyl-CoA dehydrogenase type-2. (99 aa)
N301_00441DNA-binding protein SMUBP-2. (960 aa)
N301_05335TRMT1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (674 aa)
N301_02442tRNA wybutosine-synthesizing protein 5. (289 aa)
N301_06014Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1251 aa)
N301_01296Alkylated DNA repair protein alkB 8. (671 aa)
N301_00342Cytoplasmic tRNA 2-thiolation protein 2. (189 aa)
N301_06029Selenocysteine-specific elongation factor. (484 aa)
N301_16002tRNA selenocysteine 1-associated protein 1. (194 aa)
N301_11597Putative methyltransferase NSUN3; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (336 aa)
N301_02099Putative D-tyrosyl-tRNA(Tyr) deacylase 2. (131 aa)
N301_01513Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (969 aa)
N301_08268PseudoU_synth_1 domain-containing protein. (330 aa)
N301_01548Putative methyltransferase NSUN6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (469 aa)
N301_07598O-phosphoseryl-tRNA(Sec) selenium transferase. (459 aa)
N301_09346Uncharacterized protein. (401 aa)
N301_02198Alkylated DNA repair protein alkB 1. (324 aa)
N301_01151N-acetyltransferase 10. (984 aa)
N301_14244Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (647 aa)
N301_04143Uncharacterized protein. (342 aa)
N301_12572Aminoacyl tRNA synthase complex-interacting multifunctional protein 1. (317 aa)
N301_12602tRNA methyltransferase 10 A. (302 aa)
N301_01934Putative methyltransferase KIAA1456. (403 aa)
N301_00501Eukaryotic translation initiation factor 2A. (581 aa)
N301_00397tRNA (Cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (713 aa)
N301_08582Eukaryotic translation initiation factor 2-alpha kinase 4. (1596 aa)
N301_10543Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (387 aa)
N301_15262Tyrosine--tRNA ligase. (509 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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