(11 nodes) RNA polymerase II general transcription initiation factor activity network (Charadrius vociferus)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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textmining

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protein homology

Your Input:
	N301_03170	General transcription factor IIE subunit 1. (442 aa)
	N301_09665	Paired mesoderm homeobox protein 1. (157 aa)
	N301_14294	TATA-box-binding protein. (305 aa)
	N301_14415	Transcription initiation factor TFIID subunit 7. (346 aa)
	N301_05206	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (290 aa)
	N301_03446	Transcription initiation factor IIB. (310 aa)
	N301_08251	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
	N301_15628	TATA box-binding protein-like 1. (161 aa)
	N301_11273	Transcription initiation factor TFIID subunit 1. (1848 aa)
	N301_08398	General transcription factor IIH subunit 3. (305 aa)
	N301_00276	Transcription initiation factor IIA subunit 1. (377 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00276	N301_03170	A0A0A0A237	A0A0A0A4S6	Transcription initiation factor IIA subunit 1.	General transcription factor IIE subunit 1.	0.984
N301_00276	N301_03446	A0A0A0A237	A0A0A0AI13	Transcription initiation factor IIA subunit 1.	Transcription initiation factor IIB.	0.986
N301_00276	N301_05206	A0A0A0A237	A0A0A0AK98	Transcription initiation factor IIA subunit 1.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.980
N301_00276	N301_08251	A0A0A0A237	A0A0A0AHH0	Transcription initiation factor IIA subunit 1.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.999
N301_00276	N301_08398	A0A0A0A237	A0A0A0A5R7	Transcription initiation factor IIA subunit 1.	General transcription factor IIH subunit 3.	0.964
N301_00276	N301_11273	A0A0A0A237	A0A0A0A7T2	Transcription initiation factor IIA subunit 1.	Transcription initiation factor TFIID subunit 1.	0.898
N301_00276	N301_14294	A0A0A0A237	A0A0A0AV65	Transcription initiation factor IIA subunit 1.	TATA-box-binding protein.	0.996
N301_00276	N301_14415	A0A0A0A237	A0A0A0ART2	Transcription initiation factor IIA subunit 1.	Transcription initiation factor TFIID subunit 7.	0.877
N301_00276	N301_15628	A0A0A0A237	A0A0A0A8L9	Transcription initiation factor IIA subunit 1.	TATA box-binding protein-like 1.	0.974
N301_03170	N301_00276	A0A0A0A4S6	A0A0A0A237	General transcription factor IIE subunit 1.	Transcription initiation factor IIA subunit 1.	0.984
N301_03170	N301_03446	A0A0A0A4S6	A0A0A0AI13	General transcription factor IIE subunit 1.	Transcription initiation factor IIB.	0.989
N301_03170	N301_05206	A0A0A0A4S6	A0A0A0AK98	General transcription factor IIE subunit 1.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.999
N301_03170	N301_08251	A0A0A0A4S6	A0A0A0AHH0	General transcription factor IIE subunit 1.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.984
N301_03170	N301_08398	A0A0A0A4S6	A0A0A0A5R7	General transcription factor IIE subunit 1.	General transcription factor IIH subunit 3.	0.995
N301_03170	N301_11273	A0A0A0A4S6	A0A0A0A7T2	General transcription factor IIE subunit 1.	Transcription initiation factor TFIID subunit 1.	0.879
N301_03170	N301_14294	A0A0A0A4S6	A0A0A0AV65	General transcription factor IIE subunit 1.	TATA-box-binding protein.	0.985
N301_03170	N301_14415	A0A0A0A4S6	A0A0A0ART2	General transcription factor IIE subunit 1.	Transcription initiation factor TFIID subunit 7.	0.910
N301_03170	N301_15628	A0A0A0A4S6	A0A0A0A8L9	General transcription factor IIE subunit 1.	TATA box-binding protein-like 1.	0.963
N301_03446	N301_00276	A0A0A0AI13	A0A0A0A237	Transcription initiation factor IIB.	Transcription initiation factor IIA subunit 1.	0.986
N301_03446	N301_03170	A0A0A0AI13	A0A0A0A4S6	Transcription initiation factor IIB.	General transcription factor IIE subunit 1.	0.989