34 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_01527	Transcriptional repressor p66-beta. (352 aa)
	N301_08640	Transcriptional-regulating factor 1. (1167 aa)
	N301_10097	annotation not available (955 aa)
	N301_11810	ELM2 and SANT domain-containing protein 1. (1018 aa)
	N301_05462	REST corepressor 1. (357 aa)
	N301_08967	Histone deacetylase 2. (477 aa)
	N301_01263	Mesoderm induction early response protein 2. (580 aa)
	N301_13144	RE1-silencing transcription factor. (892 aa)
	N301_13149	Homeodomain-only protein. (73 aa)
	N301_14204	Histone deacetylase 11. (353 aa)
	N301_06593	ETS domain-containing protein Elk-4. (451 aa)
	N301_00881	Methyl-CpG-binding domain protein 3. (253 aa)
	N301_10270	Methyl-CpG-binding domain protein 2. (190 aa)
	N301_15493	PR domain zinc finger protein 5. (602 aa)
	N301_00689	F-box-like/WD repeat-containing protein TBL1X. (499 aa)
	N301_08887	Paired amphipathic helix protein Sin3a. (1274 aa)
	N301_00681	Male-specific lethal 3. (490 aa)
	N301_02531	Histone deacetylase 1. (439 aa)
	N301_10423	Histone deacetylase 10. (343 aa)
	N301_10336	Mesoderm induction early response protein 1. (510 aa)
	N301_15689	Histone deacetylase 8. (343 aa)
	N301_13833	Mortality factor 4-like 1. (345 aa)
	N301_07526	Eomesodermin. (339 aa)
	N301_15258	Histone-binding protein RBBP4. (420 aa)
	N301_15643	Histone deacetylase 3. (417 aa)
	N301_04778	NAD-dependent protein deacetylase sirtuin-6. (336 aa)
	N301_06496	Histone deacetylase 9. (1054 aa)
	N301_09318	NAD-dependent protein deacetylase sirtuin-7. (226 aa)
	N301_07241	Paired amphipathic helix protein Sin3b. (1082 aa)
	N301_07773	F-box-like/WD repeat-containing protein TBL1XR1. (506 aa)
	N301_08653	Metastasis-associated protein MTA3. (590 aa)
	N301_04763	Histone-binding protein RBBP7. (419 aa)
	N301_08632	REST corepressor 3. (486 aa)
	N301_09035	Histone deacetylase 4. (1074 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00681	N301_00881	A0A0A0AKL0	A0A0A0ANU1	Male-specific lethal 3.	Methyl-CpG-binding domain protein 3.	0.401
N301_00681	N301_01527	A0A0A0AKL0	A0A099ZXY7	Male-specific lethal 3.	Transcriptional repressor p66-beta.	0.523
N301_00681	N301_02531	A0A0A0AKL0	A0A0A0AG00	Male-specific lethal 3.	Histone deacetylase 1.	0.741
N301_00681	N301_04763	A0A0A0AKL0	A0A0A0A0D9	Male-specific lethal 3.	Histone-binding protein RBBP7.	0.861
N301_00681	N301_06496	A0A0A0AKL0	A0A0A0A704	Male-specific lethal 3.	Histone deacetylase 9.	0.624
N301_00681	N301_07241	A0A0A0AKL0	A0A0A0A3W6	Male-specific lethal 3.	Paired amphipathic helix protein Sin3b.	0.700
N301_00681	N301_08653	A0A0A0AKL0	A0A0A0A1A4	Male-specific lethal 3.	Metastasis-associated protein MTA3.	0.510
N301_00681	N301_08887	A0A0A0AKL0	A0A0A0AL58	Male-specific lethal 3.	Paired amphipathic helix protein Sin3a.	0.700
N301_00681	N301_08967	A0A0A0AKL0	A0A0A0AZW4	Male-specific lethal 3.	Histone deacetylase 2.	0.741
N301_00681	N301_09035	A0A0A0AKL0	A0A099ZX46	Male-specific lethal 3.	Histone deacetylase 4.	0.624
N301_00681	N301_10270	A0A0A0AKL0	A0A0A0AN05	Male-specific lethal 3.	Methyl-CpG-binding domain protein 2.	0.401
N301_00681	N301_10423	A0A0A0AKL0	A0A0A0AFB7	Male-specific lethal 3.	Histone deacetylase 10.	0.624
N301_00681	N301_13833	A0A0A0AKL0	A0A0A0AB05	Male-specific lethal 3.	Mortality factor 4-like 1.	0.530
N301_00681	N301_14204	A0A0A0AKL0	A0A0A0AT93	Male-specific lethal 3.	Histone deacetylase 11.	0.624
N301_00681	N301_15258	A0A0A0AKL0	A0A0A0AA56	Male-specific lethal 3.	Histone-binding protein RBBP4.	0.861
N301_00681	N301_15643	A0A0A0AKL0	A0A0A0A8E8	Male-specific lethal 3.	Histone deacetylase 3.	0.741
N301_00681	N301_15689	A0A0A0AKL0	A0A0A0ADQ2	Male-specific lethal 3.	Histone deacetylase 8.	0.741
N301_00689	N301_02531	A0A0A0AM37	A0A0A0AG00	F-box-like/WD repeat-containing protein TBL1X.	Histone deacetylase 1.	0.852
N301_00689	N301_06496	A0A0A0AM37	A0A0A0A704	F-box-like/WD repeat-containing protein TBL1X.	Histone deacetylase 9.	0.670
N301_00689	N301_07241	A0A0A0AM37	A0A0A0A3W6	F-box-like/WD repeat-containing protein TBL1X.	Paired amphipathic helix protein Sin3b.	0.652