30 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_15827	Metalloprotease TIKI2. (137 aa)
	N301_15826	Metalloprotease TIKI1. (189 aa)
	N301_06747	Tyrosine-protein kinase transmembrane receptor ROR2. (96 aa)
	N301_13489	Frizzled-8; Belongs to the G-protein coupled receptor Fz/Smo family. (209 aa)
	N301_10058	Frizzled-3; Belongs to the G-protein coupled receptor Fz/Smo family. (515 aa)
	N301_16189	Receptor-type tyrosine-protein phosphatase O. (1193 aa)
	N301_16304	Low-density lipoprotein receptor-related protein 6. (1594 aa)
	N301_00142	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family. (418 aa)
	N301_10424	Secreted frizzled-related protein 2. (278 aa)
	N301_10326	Protein wntless. (541 aa)
	N301_03309	Metalloprotease TIKI2. (137 aa)
	N301_10350	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (803 aa)
	N301_03308	Metalloprotease TIKI2. (189 aa)
	N301_15835	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family. (329 aa)
	N301_11555	Secreted frizzled-related protein 5. (258 aa)
	N301_01997	Secreted frizzled-related protein 3. (160 aa)
	N301_08259	Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. (564 aa)
	N301_04837	Tyrosine-protein kinase RYK. (478 aa)
	N301_13891	Frizzled-9; Belongs to the G-protein coupled receptor Fz/Smo family. (529 aa)
	N301_02477	Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family. (441 aa)
	N301_11145	Low-density lipoprotein receptor-related protein 5. (1545 aa)
	N301_02469	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family. (545 aa)
	N301_14010	Protein APCDD1. (496 aa)
	N301_02578	Collagen triple helix repeat-containing protein 1. (194 aa)
	N301_02579	Frizzled-6; Belongs to the G-protein coupled receptor Fz/Smo family. (698 aa)
	N301_13959	Tyrosine-protein kinase transmembrane receptor ROR2. (778 aa)
	N301_02790	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (530 aa)
	N301_01331	Secreted frizzled-related protein 5. (292 aa)
	N301_06269	Protein APCDD1. (252 aa)
	N301_13180	Secreted frizzled-related protein 2. (195 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00142	N301_01331	A0A0A0A6F2	A0A0A0B0I1	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 5.	0.775
N301_00142	N301_01997	A0A0A0A6F2	A0A0A0APD0	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 3.	0.826
N301_00142	N301_02469	A0A0A0A6F2	A0A0A0ATV2	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family.	0.521
N301_00142	N301_02477	A0A0A0A6F2	A0A0A0AS69	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family.	0.486
N301_00142	N301_02579	A0A0A0A6F2	A0A0A0AXN3	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-6; Belongs to the G-protein coupled receptor Fz/Smo family.	0.635
N301_00142	N301_02790	A0A0A0A6F2	A0A0A0B0A9	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.521
N301_00142	N301_04837	A0A0A0A6F2	A0A0A0AQ49	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Tyrosine-protein kinase RYK.	0.903
N301_00142	N301_06747	A0A0A0A6F2	A0A0A0A238	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Tyrosine-protein kinase transmembrane receptor ROR2.	0.821
N301_00142	N301_10058	A0A0A0A6F2	A0A0A0A5N2	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-3; Belongs to the G-protein coupled receptor Fz/Smo family.	0.630
N301_00142	N301_10350	A0A0A0A6F2	A0A0A0AEX2	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.882
N301_00142	N301_10424	A0A0A0A6F2	A0A0A0AC86	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 2.	0.660
N301_00142	N301_11145	A0A0A0A6F2	A0A0A0ATB4	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Low-density lipoprotein receptor-related protein 5.	0.941
N301_00142	N301_11555	A0A0A0A6F2	A0A0A0ALY5	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 5.	0.837
N301_00142	N301_13489	A0A0A0A6F2	A0A0A0A4V2	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-8; Belongs to the G-protein coupled receptor Fz/Smo family.	0.492
N301_00142	N301_13959	A0A0A0A6F2	A0A0A0AZ21	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Tyrosine-protein kinase transmembrane receptor ROR2.	0.821
N301_00142	N301_15835	A0A0A0A6F2	A0A0A0AID9	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.	0.522
N301_00142	N301_16304	A0A0A0A6F2	A0A0A0A6B0	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Low-density lipoprotein receptor-related protein 6.	0.941
N301_01331	N301_00142	A0A0A0B0I1	A0A0A0A6F2	Secreted frizzled-related protein 5.	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.775
N301_01331	N301_01997	A0A0A0B0I1	A0A0A0APD0	Secreted frizzled-related protein 5.	Secreted frizzled-related protein 3.	0.793
N301_01331	N301_02469	A0A0A0B0I1	A0A0A0ATV2	Secreted frizzled-related protein 5.	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family.	0.536