55 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_04762	Gamma-taxilin. (318 aa)
	N301_13431	Syntabulin. (641 aa)
	N301_14913	Vacuolar protein sorting-associated protein 54. (976 aa)
	N301_06763	Complexin-1. (124 aa)
	N301_07496	Synaptobrevin. (110 aa)
	N301_02326	Syntaxin-binding protein 5. (1101 aa)
	N301_03168	Syntaxin-binding protein 5-like. (1091 aa)
	N301_04441	Alpha-soluble NSF attachment protein. (190 aa)
	N301_03743	Vacuolar protein sorting-associated protein 11. (914 aa)
	N301_01009	Vacuolar protein sorting-associated protein 18. (944 aa)
	N301_01388	Synaptosomal-associated protein 47. (420 aa)
	N301_12247	Syntaxin-8. (211 aa)
	N301_08517	Synaptotagmin-2. (404 aa)
	N301_14927	Complexin-4. (160 aa)
	N301_13915	Vesicle-associated membrane protein 3. (55 aa)
	N301_05382	Transmembrane emp24 domain-containing protein 4. (196 aa)
	N301_05080	Transmembrane emp24 domain-containing protein 11. (196 aa)
	N301_07270	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (473 aa)
	N301_15251	Alpha-taxilin. (321 aa)
	N301_07269	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (97 aa)
	N301_14944	Protein FAM172A. (416 aa)
	N301_01913	Sec1 family domain-containing protein 2. (319 aa)
	N301_03359	E3 ubiquitin-protein ligase HECTD3. (686 aa)
	N301_03526	Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (573 aa)
	N301_08207	Protein unc-13 C. (2160 aa)
	N301_15294	Vesicle-associated membrane protein 3. (97 aa)
	N301_03360	E3 ubiquitin-protein ligase HECTD3. (422 aa)
	N301_12266	Leucine-rich repeat serine/threonine-protein kinase 2. (2493 aa)
	N301_10939	Beta-soluble NSF attachment protein. (262 aa)
	N301_10944	Two pore calcium channel protein 2. (250 aa)
	N301_01912	Sec1 family domain-containing protein 2; Belongs to the STXBP/unc-18/SEC1 family. (143 aa)
	N301_10995	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (146 aa)
	N301_02093	Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
	N301_08206	Protein unc-13 A. (110 aa)
	N301_02169	Transmembrane protein Tmp21. (156 aa)
	N301_11066	Synaptotagmin-17. (464 aa)
	N301_15037	Synaptotagmin-10. (472 aa)
	N301_10945	Two pore calcium channel protein 2. (231 aa)
	N301_00728	Synaptotagmin-7. (360 aa)
	N301_00794	Synaptotagmin-6. (441 aa)
	N301_08564	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (209 aa)
	N301_12747	Golgin subfamily A member 2. (986 aa)
	N301_14009	Gamma-soluble NSF attachment protein. (295 aa)
	N301_16447	Two pore calcium channel protein 1. (811 aa)
	N301_13994	Tyrosine-protein phosphatase non-receptor type 2. (269 aa)
	N301_08308	Synaptosomal-associated protein 29. (206 aa)
	N301_09195	Protein unc-13 B. (110 aa)
	N301_08361	Arb2 domain-containing protein. (306 aa)
	N301_09658	Vesicle-associated membrane protein 4. (86 aa)
	N301_09697	Syntaxin-6; Belongs to the syntaxin family. (239 aa)
	N301_06185	Syntaphilin. (261 aa)
	N301_00002	Vesicle-associated membrane protein 3. (43 aa)
	N301_15801	Synaptotagmin-1. (424 aa)
	N301_06268	Syntaxin-16. (275 aa)
	N301_04325	Synaptotagmin-9. (443 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00002	N301_00728	A0A0A0B0M4	A0A0A0ANA9	Vesicle-associated membrane protein 3.	Synaptotagmin-7.	0.490
N301_00002	N301_00794	A0A0A0B0M4	A0A0A0ANL6	Vesicle-associated membrane protein 3.	Synaptotagmin-6.	0.490
N301_00002	N301_01388	A0A0A0B0M4	A0A0A0A7Z7	Vesicle-associated membrane protein 3.	Synaptosomal-associated protein 47.	0.794
N301_00002	N301_02093	A0A0A0B0M4	A0A0A0AK41	Vesicle-associated membrane protein 3.	Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.	0.486
N301_00002	N301_03526	A0A0A0B0M4	A0A0A0AGW7	Vesicle-associated membrane protein 3.	Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.	0.783
N301_00002	N301_04441	A0A0A0B0M4	A0A0A0A3D9	Vesicle-associated membrane protein 3.	Alpha-soluble NSF attachment protein.	0.847
N301_00002	N301_06268	A0A0A0B0M4	A0A0A0B1Q9	Vesicle-associated membrane protein 3.	Syntaxin-16.	0.839
N301_00002	N301_06763	A0A0A0B0M4	A0A0A0A248	Vesicle-associated membrane protein 3.	Complexin-1.	0.659
N301_00002	N301_07269	A0A0A0B0M4	A0A0A0ADS2	Vesicle-associated membrane protein 3.	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.	0.783
N301_00002	N301_07270	A0A0A0B0M4	A0A0A0AAP7	Vesicle-associated membrane protein 3.	Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.	0.783
N301_00002	N301_08206	A0A0A0B0M4	A0A0A0AK66	Vesicle-associated membrane protein 3.	Protein unc-13 A.	0.561
N301_00002	N301_08207	A0A0A0B0M4	A0A0A0AHC5	Vesicle-associated membrane protein 3.	Protein unc-13 C.	0.561
N301_00002	N301_08308	A0A0A0B0M4	A0A0A0ARY7	Vesicle-associated membrane protein 3.	Synaptosomal-associated protein 29.	0.794
N301_00002	N301_08517	A0A0A0B0M4	A0A0A0A8D2	Vesicle-associated membrane protein 3.	Synaptotagmin-2.	0.490
N301_00002	N301_08564	A0A0A0B0M4	A0A0A0ANY5	Vesicle-associated membrane protein 3.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.794
N301_00002	N301_09195	A0A0A0B0M4	A0A0A0ASW9	Vesicle-associated membrane protein 3.	Protein unc-13 B.	0.561
N301_00002	N301_09697	A0A0A0B0M4	A0A0A0AYF5	Vesicle-associated membrane protein 3.	Syntaxin-6; Belongs to the syntaxin family.	0.836
N301_00002	N301_10939	A0A0A0B0M4	A0A0A0AI06	Vesicle-associated membrane protein 3.	Beta-soluble NSF attachment protein.	0.847
N301_00002	N301_10995	A0A0A0B0M4	A0A0A0AJX2	Vesicle-associated membrane protein 3.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.794
N301_00002	N301_11066	A0A0A0B0M4	A0A0A0AKY4	Vesicle-associated membrane protein 3.	Synaptotagmin-17.	0.490