39 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_03586	E3 UFM1-protein ligase 1. (767 aa)
	N301_13994	Tyrosine-protein phosphatase non-receptor type 2. (269 aa)
	N301_04269	Tyrosine-protein kinase. (1131 aa)
	N301_15209	Uncharacterized protein. (587 aa)
	N301_15054	5-aminolevulinate synthase. (569 aa)
	N301_05462	REST corepressor 1. (357 aa)
	N301_07370	Homeobox protein PKNOX1. (420 aa)
	N301_03991	Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family. (384 aa)
	N301_15368	Tyrosine-protein kinase. (513 aa)
	N301_13153	Malignant fibrous histiocytoma-amplified sequence 1. (761 aa)
	N301_11012	Uncharacterized protein. (46 aa)
	N301_07607	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1574 aa)
	N301_10149	MADS-box domain-containing protein. (338 aa)
	N301_11933	Ubiquitin-like modifier-activating enzyme 5. (368 aa)
	N301_15454	Putative G-protein coupled receptor 116; Belongs to the G-protein coupled receptor 2 family. (1238 aa)
	N301_05871	CDK5 regulatory subunit-associated protein 3. (87 aa)
	N301_03072	Transcription factor Sp3. (690 aa)
	N301_16314	Potassium voltage-gated channel subfamily KQT member 1. (82 aa)
	N301_11970	Solute carrier family 25 member 38; Belongs to the mitochondrial carrier (TC 2.A.29) family. (301 aa)
	N301_03214	Phospholipase A(2). (127 aa)
	N301_04462	Endothelial PAS domain-containing protein 1. (854 aa)
	N301_11492	Retinoblastoma-associated protein. (870 aa)
	N301_15659	Uncharacterized protein; Belongs to the heat shock protein 70 family. (525 aa)
	N301_12654	CCAAT/enhancer-binding protein gamma. (150 aa)
	N301_05083	Macrophage erythroblast attacher. (411 aa)
	N301_10760	Transmembrane protein 14C. (109 aa)
	N301_14610	Histone-lysine N-methyltransferase 2E. (1752 aa)
	N301_05164	B-cell lymphoma 6 protein. (709 aa)
	N301_07945	GATA-binding factor 3. (444 aa)
	N301_00829	Caspase-3; Belongs to the peptidase C14A family. (242 aa)
	N301_08862	AT-rich interactive domain-containing protein 4A. (1200 aa)
	N301_11531	Angiotensin-converting enzyme. (1213 aa)
	N301_12935	Heterochromatin-associated protein MENT; Belongs to the serpin family. (410 aa)
	N301_01917	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (938 aa)
	N301_14957	Tripartite motif-containing protein 10. (160 aa)
	N301_12934	Heterochromatin-associated protein MENT; Belongs to the serpin family. (407 aa)
	N301_05995	Condensin-2 complex subunit G2. (1108 aa)
	N301_11098	Phospholipase A(2). (123 aa)
	N301_02075	Uncharacterized protein C15orf41. (248 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00829	N301_04269	A0A0A0AG76	A0A0A0AT86	Caspase-3; Belongs to the peptidase C14A family.	Tyrosine-protein kinase.	0.525
N301_01917	N301_04269	A0A0A0AIG7	A0A0A0AT86	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Tyrosine-protein kinase.	0.579
N301_01917	N301_15368	A0A0A0AIG7	A0A0A0AZZ7	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Tyrosine-protein kinase.	0.771
N301_02075	N301_07945	A0A0A0AP78	A0A0A0AF25	Uncharacterized protein C15orf41.	GATA-binding factor 3.	0.434
N301_02075	N301_15054	A0A0A0AP78	A0A0A0AWF7	Uncharacterized protein C15orf41.	5-aminolevulinate synthase.	0.509
N301_03072	N301_08862	A0A0A0A3J4	A0A0A0AH02	Transcription factor Sp3.	AT-rich interactive domain-containing protein 4A.	0.441
N301_03214	N301_11098	A0A0A0A4V8	A0A0A0ALX4	Phospholipase A(2).	Phospholipase A(2).	0.780
N301_03586	N301_05871	A0A0A0ARB6	A0A0A0A2T6	E3 UFM1-protein ligase 1.	CDK5 regulatory subunit-associated protein 3.	0.947
N301_03586	N301_11933	A0A0A0ARB6	A0A0A0A038	E3 UFM1-protein ligase 1.	Ubiquitin-like modifier-activating enzyme 5.	0.838
N301_03991	N301_07607	A0A0A0AZB1	A0A099ZUN6	Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.710
N301_04269	N301_00829	A0A0A0AT86	A0A0A0AG76	Tyrosine-protein kinase.	Caspase-3; Belongs to the peptidase C14A family.	0.525
N301_04269	N301_01917	A0A0A0AT86	A0A0A0AIG7	Tyrosine-protein kinase.	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.579
N301_04269	N301_07607	A0A0A0AT86	A0A099ZUN6	Tyrosine-protein kinase.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.409
N301_04269	N301_11012	A0A0A0AT86	A0A0A0B2Q2	Tyrosine-protein kinase.	Uncharacterized protein.	0.602
N301_04269	N301_13994	A0A0A0AT86	A0A0A0ARQ8	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type 2.	0.897
N301_04269	N301_15368	A0A0A0AT86	A0A0A0AZZ7	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.697
N301_05164	N301_07945	A0A0A0AEU8	A0A0A0AF25	B-cell lymphoma 6 protein.	GATA-binding factor 3.	0.410
N301_05164	N301_08862	A0A0A0AEU8	A0A0A0AH02	B-cell lymphoma 6 protein.	AT-rich interactive domain-containing protein 4A.	0.441
N301_05462	N301_08862	A0A0A0AX86	A0A0A0AH02	REST corepressor 1.	AT-rich interactive domain-containing protein 4A.	0.981
N301_05871	N301_03586	A0A0A0A2T6	A0A0A0ARB6	CDK5 regulatory subunit-associated protein 3.	E3 UFM1-protein ligase 1.	0.947