36 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_00693	NudC domain-containing protein 3. (197 aa)
	N301_03363	Tctex1 domain-containing protein 1. (107 aa)
	N301_05159	Tctex1 domain-containing protein 2. (105 aa)
	N301_16754	Dynactin subunit 1. (110 aa)
	N301_11046	Dynein heavy chain 3, axonemal. (4045 aa)
	N301_16755	Dynactin subunit 1. (520 aa)
	N301_04542	Dynein heavy chain 8, axonemal. (169 aa)
	N301_09539	Sorting nexin-4. (402 aa)
	N301_12739	WD repeat-containing protein 34. (489 aa)
	N301_06769	Dynactin subunit 2. (103 aa)
	N301_09212	Dynein intermediate chain 1, axonemal. (584 aa)
	N301_16421	Dynein light chain. (92 aa)
	N301_04903	Dynein light chain Tctex-type 3. (107 aa)
	N301_02421	Dynein heavy chain 7, axonemal. (3426 aa)
	N301_11763	Dynein light chain roadblock-type 2. (70 aa)
	N301_14287	Tctex1 domain-containing protein 3. (120 aa)
	N301_10045	Dynein light chain roadblock-type 1. (95 aa)
	N301_08809	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (451 aa)
	N301_03083	Cytoplasmic dynein 1 intermediate chain 2. (629 aa)
	N301_11809	Dynein light chain 1, axonemal. (179 aa)
	N301_01405	Dynein heavy chain 9, axonemal. (4382 aa)
	N301_11998	Dynein heavy chain 7, axonemal. (3864 aa)
	N301_10072	Dynein regulatory complex protein 1. (706 aa)
	N301_01759	Dynein light chain Tctex-type 1. (103 aa)
	N301_05343	Nucleoprotein TPR. (2317 aa)
	N301_06413	Uncharacterized protein. (234 aa)
	N301_12876	Coiled-coil domain-containing protein 65. (113 aa)
	N301_01622	Coiled-coil domain-containing protein 103. (203 aa)
	N301_03432	WD repeat-containing protein 63. (804 aa)
	N301_10339	Tctex1 domain-containing protein 1-A. (111 aa)
	N301_10164	Dynein light chain. (106 aa)
	N301_12633	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (457 aa)
	N301_16234	Protein CASC1. (655 aa)
	N301_08130	Dynein light chain. (91 aa)
	N301_04449	Cytoplasmic dynein 2 light intermediate chain 1. (349 aa)
	N301_15119	Thioredoxin domain-containing protein 3. (57 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00693	N301_01405	A0A0A0AAW3	A0A0A0A0F6	NudC domain-containing protein 3.	Dynein heavy chain 9, axonemal.	0.426
N301_00693	N301_02421	A0A0A0AAW3	A0A0A0AV14	NudC domain-containing protein 3.	Dynein heavy chain 7, axonemal.	0.425
N301_00693	N301_03083	A0A0A0AAW3	A0A099ZZ66	NudC domain-containing protein 3.	Cytoplasmic dynein 1 intermediate chain 2.	0.580
N301_00693	N301_03432	A0A0A0AAW3	A0A0A0AF18	NudC domain-containing protein 3.	WD repeat-containing protein 63.	0.502
N301_00693	N301_04542	A0A0A0AAW3	A0A0A0AKI7	NudC domain-containing protein 3.	Dynein heavy chain 8, axonemal.	0.426
N301_00693	N301_06413	A0A0A0AAW3	A0A099ZYP6	NudC domain-containing protein 3.	Uncharacterized protein.	0.425
N301_00693	N301_08130	A0A0A0AAW3	A0A0A0A772	NudC domain-containing protein 3.	Dynein light chain.	0.541
N301_00693	N301_08809	A0A0A0AAW3	A0A0A0B0D5	NudC domain-containing protein 3.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.621
N301_00693	N301_09212	A0A0A0AAW3	A0A0A0AR59	NudC domain-containing protein 3.	Dynein intermediate chain 1, axonemal.	0.502
N301_00693	N301_10164	A0A0A0AAW3	A0A0A0ACG4	NudC domain-containing protein 3.	Dynein light chain.	0.541
N301_00693	N301_11046	A0A0A0AAW3	A0A0A0AJ78	NudC domain-containing protein 3.	Dynein heavy chain 3, axonemal.	0.425
N301_00693	N301_11998	A0A0A0AAW3	A0A0A0A3A5	NudC domain-containing protein 3.	Dynein heavy chain 7, axonemal.	0.425
N301_00693	N301_12633	A0A0A0AAW3	A0A0A0ABI4	NudC domain-containing protein 3.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.628
N301_00693	N301_12739	A0A0A0AAW3	A0A0A0AMN8	NudC domain-containing protein 3.	WD repeat-containing protein 34.	0.502
N301_00693	N301_16421	A0A0A0AAW3	A0A0A0ARL3	NudC domain-containing protein 3.	Dynein light chain.	0.541
N301_01405	N301_00693	A0A0A0A0F6	A0A0A0AAW3	Dynein heavy chain 9, axonemal.	NudC domain-containing protein 3.	0.426
N301_01405	N301_01622	A0A0A0A0F6	A0A0A0AFH5	Dynein heavy chain 9, axonemal.	Coiled-coil domain-containing protein 103.	0.557
N301_01405	N301_01759	A0A0A0A0F6	A0A0A0AB13	Dynein heavy chain 9, axonemal.	Dynein light chain Tctex-type 1.	0.919
N301_01405	N301_02421	A0A0A0A0F6	A0A0A0AV14	Dynein heavy chain 9, axonemal.	Dynein heavy chain 7, axonemal.	0.588
N301_01405	N301_03083	A0A0A0A0F6	A0A099ZZ66	Dynein heavy chain 9, axonemal.	Cytoplasmic dynein 1 intermediate chain 2.	0.962