13 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_04491	Mothers against decapentaplegic homolog. (546 aa)
	N301_11477	Inhibitor of growth protein. (220 aa)
	N301_15318	Folliculin. (581 aa)
	N301_02200	SNW domain-containing protein 1. (538 aa)
	N301_03409	PDZ domain-containing protein GIPC1. (240 aa)
	N301_12385	UPF0687 protein C20orf27. (169 aa)
	N301_08578	Thrombospondin-1. (1110 aa)
	N301_13283	CREB-binding protein. (2391 aa)
	N301_13261	Axin-1. (841 aa)
	N301_14600	PDZ domain-containing protein GIPC3. (126 aa)
	N301_08752	PDZ domain-containing protein GIPC1. (109 aa)
	N301_01407	Myocardin. (951 aa)
	N301_06919	Solute carrier family 2, facilitated glucose transporter member 10; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (541 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_01407	N301_13283	A0A099ZYT1	A0A0A0A874	Myocardin.	CREB-binding protein.	0.406
N301_02200	N301_08578	A0A0A0ALS3	A0A0A0ADR6	SNW domain-containing protein 1.	Thrombospondin-1.	0.418
N301_02200	N301_13283	A0A0A0ALS3	A0A0A0A874	SNW domain-containing protein 1.	CREB-binding protein.	0.721
N301_04491	N301_13283	A0A0A0ACE0	A0A0A0A874	Mothers against decapentaplegic homolog.	CREB-binding protein.	0.819
N301_08578	N301_02200	A0A0A0ADR6	A0A0A0ALS3	Thrombospondin-1.	SNW domain-containing protein 1.	0.418
N301_08578	N301_13283	A0A0A0ADR6	A0A0A0A874	Thrombospondin-1.	CREB-binding protein.	0.407
N301_11477	N301_13283	A0A0A0AXK8	A0A0A0A874	Inhibitor of growth protein.	CREB-binding protein.	0.696
N301_12385	N301_13283	A0A0A0AGJ0	A0A0A0A874	UPF0687 protein C20orf27.	CREB-binding protein.	0.432
N301_13283	N301_01407	A0A0A0A874	A0A099ZYT1	CREB-binding protein.	Myocardin.	0.406
N301_13283	N301_02200	A0A0A0A874	A0A0A0ALS3	CREB-binding protein.	SNW domain-containing protein 1.	0.721
N301_13283	N301_04491	A0A0A0A874	A0A0A0ACE0	CREB-binding protein.	Mothers against decapentaplegic homolog.	0.819
N301_13283	N301_08578	A0A0A0A874	A0A0A0ADR6	CREB-binding protein.	Thrombospondin-1.	0.407
N301_13283	N301_11477	A0A0A0A874	A0A0A0AXK8	CREB-binding protein.	Inhibitor of growth protein.	0.696
N301_13283	N301_12385	A0A0A0A874	A0A0A0AGJ0	CREB-binding protein.	UPF0687 protein C20orf27.	0.432