49 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_16154	ELKS/Rab6-interacting/CAST family member 1. (861 aa)
	N301_01583	Solute carrier family 2, facilitated glucose transporter member 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (454 aa)
	N301_10729	Vinculin. (1013 aa)
	N301_05802	Regulating synaptic membrane exocytosis protein 1. (828 aa)
	N301_14408	55 kDa erythrocyte membrane protein. (433 aa)
	N301_12767	CDK5 regulatory subunit-associated protein 2. (1807 aa)
	N301_05591	NMDA receptor synaptonuclear signaling and neuronal migration factor. (479 aa)
	N301_11708	Coactosin-like. (142 aa)
	N301_16186	Caldesmon. (765 aa)
	N301_08119	Nitric oxide synthase, inducible. (1140 aa)
	N301_09241	Protein Shroom1. (164 aa)
	N301_09240	Protein Shroom1. (358 aa)
	N301_16769	Myeloid-associated differentiation marker. (278 aa)
	N301_14904	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (378 aa)
	N301_06338	Lethal(2) giant larvae protein 2. (710 aa)
	N301_04448	Pleckstrin homology domain-containing family H member 2. (1500 aa)
	N301_13440	WD repeat-containing protein 1. (593 aa)
	N301_13733	Uncharacterized protein. (117 aa)
	N301_09060	Regulating synaptic membrane exocytosis protein 1. (234 aa)
	N301_15124	Actin-binding protein anillin. (1107 aa)
	N301_07720	Neurabin-1. (1122 aa)
	N301_03076	Neurabin-1. (1060 aa)
	N301_11967	Rab effector MyRIP. (72 aa)
	N301_11966	Rab effector MyRIP. (761 aa)
	N301_01959	Merlin. (439 aa)
	N301_09565	CLIP-associating protein 1. (1449 aa)
	N301_03864	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (414 aa)
	N301_01972	Melanophilin. (678 aa)
	N301_01159	Src substrate protein p85. (516 aa)
	N301_07812	Pejvakin. (72 aa)
	N301_16373	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (274 aa)
	N301_08917	Calcium and integrin-binding family member 2. (161 aa)
	N301_10845	Cadherin-2; Cadherins are calcium-dependent cell adhesion proteins. (885 aa)
	N301_07204	Nuclear mitotic apparatus protein 1. (449 aa)
	N301_06153	Microtubule-associated protein RP/EB family member 1. (263 aa)
	N301_02893	Regulating synaptic membrane exocytosis protein 3. (239 aa)
	N301_02406	Unconventional myosin-Ib; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1100 aa)
	N301_15789	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (272 aa)
	N301_12334	Merlin. (552 aa)
	N301_07203	Nuclear mitotic apparatus protein 1. (699 aa)
	N301_00418	Protein cordon-bleu. (423 aa)
	N301_13311	Hematopoietic lineage cell-specific protein. (481 aa)
	N301_08607	Alpha-actinin-1. (852 aa)
	N301_16707	MTSS1-like. (482 aa)
	N301_00417	Protein cordon-bleu. (844 aa)
	N301_00351	Brain acid soluble protein 1. (243 aa)
	N301_07896	Protein piccolo. (3402 aa)
	N301_15437	Unconventional myosin-Ia; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (253 aa)
	N301_05083	Macrophage erythroblast attacher. (411 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00351	N301_01159	A0A0A0ACG9	A0A0A0AL79	Brain acid soluble protein 1.	Src substrate protein p85.	0.400
N301_00351	N301_13311	A0A0A0ACG9	A0A0A0AEF4	Brain acid soluble protein 1.	Hematopoietic lineage cell-specific protein.	0.400
N301_00351	N301_14904	A0A0A0ACG9	A0A099ZXU0	Brain acid soluble protein 1.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.404
N301_00351	N301_15789	A0A0A0ACG9	A0A0A0ATL5	Brain acid soluble protein 1.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.553
N301_00417	N301_00418	A0A0A0ACN5	A0A0A0AGZ6	Protein cordon-bleu.	Protein cordon-bleu.	0.899
N301_00418	N301_00417	A0A0A0AGZ6	A0A0A0ACN5	Protein cordon-bleu.	Protein cordon-bleu.	0.899
N301_01159	N301_00351	A0A0A0AL79	A0A0A0ACG9	Src substrate protein p85.	Brain acid soluble protein 1.	0.400
N301_01159	N301_08607	A0A0A0AL79	A0A0A0ADT3	Src substrate protein p85.	Alpha-actinin-1.	0.433
N301_01159	N301_10729	A0A0A0AL79	A0A0A0ATD4	Src substrate protein p85.	Vinculin.	0.427
N301_01159	N301_13311	A0A0A0AL79	A0A0A0AEF4	Src substrate protein p85.	Hematopoietic lineage cell-specific protein.	0.816
N301_01159	N301_13733	A0A0A0AL79	A0A0A0A641	Src substrate protein p85.	Uncharacterized protein.	0.401
N301_01159	N301_14904	A0A0A0AL79	A0A099ZXU0	Src substrate protein p85.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.917
N301_01159	N301_15789	A0A0A0AL79	A0A0A0ATL5	Src substrate protein p85.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.648
N301_01159	N301_16373	A0A0A0AL79	A0A0A0AKG7	Src substrate protein p85.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.607
N301_01959	N301_12334	A0A0A0A1D6	A0A0A0AHI1	Merlin.	Merlin.	0.825
N301_02406	N301_14904	A0A0A0AUZ8	A0A099ZXU0	Unconventional myosin-Ib; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.688
N301_02893	N301_05802	A0A0A0AW44	A0A0A0AR06	Regulating synaptic membrane exocytosis protein 3.	Regulating synaptic membrane exocytosis protein 1.	0.523
N301_02893	N301_07896	A0A0A0AW44	A0A0A0ABU8	Regulating synaptic membrane exocytosis protein 3.	Protein piccolo.	0.675
N301_02893	N301_14408	A0A0A0AW44	A0A0A0AQ31	Regulating synaptic membrane exocytosis protein 3.	55 kDa erythrocyte membrane protein.	0.564
N301_02893	N301_16154	A0A0A0AW44	A0A0A0A752	Regulating synaptic membrane exocytosis protein 3.	ELKS/Rab6-interacting/CAST family member 1.	0.702