43 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_03489	Polypyrimidine tract-binding protein 2. (519 aa)
	N301_10880	Uncharacterized protein C5orf42. (218 aa)
	N301_13496	Neuropilin-1. (898 aa)
	N301_10882	Uncharacterized protein C5orf42. (116 aa)
	N301_14036	Glia-derived nexin; Belongs to the serpin family. (396 aa)
	N301_11960	Catenin beta-1. (777 aa)
	N301_11110	Protein scribble. (459 aa)
	N301_10881	Uncharacterized protein C5orf42. (167 aa)
	N301_16261	Putative tubulin polyglutamylase TTLL1. (425 aa)
	N301_08711	Leucine-rich repeat-containing protein 1. (472 aa)
	N301_00142	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family. (418 aa)
	N301_08722	Bone morphogenetic protein 5. (453 aa)
	N301_04063	Kelch-like 1. (522 aa)
	N301_14147	Noggin. (216 aa)
	N301_11196	Kelch-like 4. (720 aa)
	N301_02255	Dixin. (698 aa)
	N301_08010	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (479 aa)
	N301_01705	Jouberin. (1164 aa)
	N301_10326	Protein wntless. (541 aa)
	N301_01871	Paired mesoderm homeobox protein 2B. (141 aa)
	N301_11308	Protein fantom. (1272 aa)
	N301_12564	Lymphoid enhancer-binding factor 1. (315 aa)
	N301_03533	Kinesin-like KIF14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1115 aa)
	N301_12558	Protein transport protein Sec24B. (1167 aa)
	N301_05310	Tyrosine-protein kinase. (1099 aa)
	N301_05635	Cytosolic carboxypeptidase 1. (981 aa)
	N301_08570	Tau-tubulin kinase 2. (1251 aa)
	N301_12978	Seizure 6-like. (512 aa)
	N301_01603	Nicastrin. (678 aa)
	N301_05663	LIM/homeobox protein Lhx1. (321 aa)
	N301_03927	Mothers against decapentaplegic homolog. (449 aa)
	N301_14296	Dihydroxyacetone phosphate acyltransferase. (680 aa)
	N301_11886	Homeobox protein Hox-B3. (394 aa)
	N301_07307	Potassium voltage-gated channel subfamily E member 1. (126 aa)
	N301_14290	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (614 aa)
	N301_00478	Cell cycle exit and neuronal differentiation protein 1. (130 aa)
	N301_00029	Paired mesoderm homeobox protein 2B. (50 aa)
	N301_11885	Homeobox protein Hox-B1. (116 aa)
	N301_12531	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family. (612 aa)
	AARS	Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (963 aa)
	N301_06110	Bone morphogenetic protein 7. (343 aa)
	N301_01657	Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family. (289 aa)
	N301_16789	Crk-like. (299 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00142	N301_11960	A0A0A0A6F2	A0A0A0A1M4	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Catenin beta-1.	0.618
N301_01603	N301_14290	A0A0A0ATN4	A0A0A0AZB3	Nicastrin.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.521
N301_01705	N301_05310	A0A0A0AAW7	A0A0A0AL44	Jouberin.	Tyrosine-protein kinase.	0.409
N301_01705	N301_11308	A0A0A0AAW7	A0A0A0AGH0	Jouberin.	Protein fantom.	0.595
N301_01705	N301_11960	A0A0A0AAW7	A0A0A0A1M4	Jouberin.	Catenin beta-1.	0.441
N301_03927	N301_06110	A0A0A0AV45	A0A0A0B1D4	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 7.	0.503
N301_03927	N301_08722	A0A0A0AV45	A0A0A0A6F4	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 5.	0.441
N301_03927	N301_11960	A0A0A0AV45	A0A0A0A1M4	Mothers against decapentaplegic homolog.	Catenin beta-1.	0.613
N301_03927	N301_12564	A0A0A0AV45	A0A0A0AGR6	Mothers against decapentaplegic homolog.	Lymphoid enhancer-binding factor 1.	0.597
N301_05310	N301_01705	A0A0A0AL44	A0A0A0AAW7	Tyrosine-protein kinase.	Jouberin.	0.409
N301_05310	N301_11960	A0A0A0AL44	A0A0A0A1M4	Tyrosine-protein kinase.	Catenin beta-1.	0.781
N301_05310	N301_16789	A0A0A0AL44	A0A0A0B3C0	Tyrosine-protein kinase.	Crk-like.	0.964
N301_06110	N301_03927	A0A0A0B1D4	A0A0A0AV45	Bone morphogenetic protein 7.	Mothers against decapentaplegic homolog.	0.503
N301_06110	N301_14147	A0A0A0B1D4	A0A0A0A8P5	Bone morphogenetic protein 7.	Noggin.	0.957
N301_08010	N301_11960	A0A0A0AAT7	A0A0A0A1M4	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Catenin beta-1.	0.478
N301_08711	N301_11960	A0A0A0A501	A0A0A0A1M4	Leucine-rich repeat-containing protein 1.	Catenin beta-1.	0.452
N301_08722	N301_03927	A0A0A0A6F4	A0A0A0AV45	Bone morphogenetic protein 5.	Mothers against decapentaplegic homolog.	0.441
N301_08722	N301_14147	A0A0A0A6F4	A0A0A0A8P5	Bone morphogenetic protein 5.	Noggin.	0.957
N301_10880	N301_10881	A0A099ZZD3	A0A0A0A3T5	Uncharacterized protein C5orf42.	Uncharacterized protein C5orf42.	0.711
N301_10880	N301_10882	A0A099ZZD3	A0A0A0A0T0	Uncharacterized protein C5orf42.	Uncharacterized protein C5orf42.	0.670