21 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_13823	Pro-cathepsin H; Belongs to the peptidase C1 family. (219 aa)
	N301_13187	Fibrinogen gamma chain. (105 aa)
	N301_02460	Caspase-8; Belongs to the peptidase C14A family. (482 aa)
	N301_02458	Caspase-10; Belongs to the peptidase C14A family. (518 aa)
	N301_16025	Hepatocyte growth factor activator. (563 aa)
	N301_03252	Delta(24)-sterol reductase. (440 aa)
	N301_05627	Cathepsin L1; Belongs to the peptidase C1 family. (293 aa)
	N301_01161	Protein FADD. (179 aa)
	N301_10728	Urokinase-type plasminogen activator. (387 aa)
	N301_06639	Bcl-2 homologous antagonist/killer. (188 aa)
	N301_03620	Aspartyl/asparaginyl beta-hydroxylase. (724 aa)
	N301_00339	Cell death activator CIDE-3. (176 aa)
	N301_02209	Legumain. (430 aa)
	N301_05218	Digestive cysteine proteinase 2; Belongs to the peptidase C1 family. (210 aa)
	N301_09910	Receptor-interacting serine/threonine-protein kinase 2. (201 aa)
	N301_07466	Complement C1r subcomponent; Belongs to the peptidase S1 family. (697 aa)
	N301_08064	Beta-2-glycoprotein 1. (305 aa)
	N301_11215	Coagulation factor IX. (418 aa)
	N301_14697	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. (1249 aa)
	N301_08844	Plasminogen activator; Belongs to the peptidase S1 family. (558 aa)
	N301_03239	Peptidase_M48 domain-containing protein. (460 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_01161	N301_02458	A0A0A0AMQ9	A0A0A0AV44	Protein FADD.	Caspase-10; Belongs to the peptidase C14A family.	0.977
N301_01161	N301_02460	A0A0A0AMQ9	A0A0A0AWC4	Protein FADD.	Caspase-8; Belongs to the peptidase C14A family.	0.983
N301_01161	N301_09910	A0A0A0AMQ9	A0A0A0A0T4	Protein FADD.	Receptor-interacting serine/threonine-protein kinase 2.	0.769
N301_01161	N301_14697	A0A0A0AMQ9	A0A0A0A9Q1	Protein FADD.	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	0.531
N301_01161	N301_16025	A0A0A0AMQ9	A0A0A0AUL5	Protein FADD.	Hepatocyte growth factor activator.	0.511
N301_02209	N301_05218	A0A099ZW63	A0A099ZZ09	Legumain.	Digestive cysteine proteinase 2; Belongs to the peptidase C1 family.	0.429
N301_02209	N301_05627	A0A099ZW63	A0A0A0AKE3	Legumain.	Cathepsin L1; Belongs to the peptidase C1 family.	0.603
N301_02209	N301_13823	A0A099ZW63	A0A0A0A9G7	Legumain.	Pro-cathepsin H; Belongs to the peptidase C1 family.	0.539
N301_02209	N301_14697	A0A099ZW63	A0A0A0A9Q1	Legumain.	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	0.632
N301_02458	N301_01161	A0A0A0AV44	A0A0A0AMQ9	Caspase-10; Belongs to the peptidase C14A family.	Protein FADD.	0.977
N301_02458	N301_02460	A0A0A0AV44	A0A0A0AWC4	Caspase-10; Belongs to the peptidase C14A family.	Caspase-8; Belongs to the peptidase C14A family.	0.840
N301_02458	N301_06639	A0A0A0AV44	A0A0A0ASC8	Caspase-10; Belongs to the peptidase C14A family.	Bcl-2 homologous antagonist/killer.	0.449
N301_02458	N301_09910	A0A0A0AV44	A0A0A0A0T4	Caspase-10; Belongs to the peptidase C14A family.	Receptor-interacting serine/threonine-protein kinase 2.	0.687
N301_02458	N301_14697	A0A0A0AV44	A0A0A0A9Q1	Caspase-10; Belongs to the peptidase C14A family.	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	0.968
N301_02460	N301_01161	A0A0A0AWC4	A0A0A0AMQ9	Caspase-8; Belongs to the peptidase C14A family.	Protein FADD.	0.983
N301_02460	N301_02458	A0A0A0AWC4	A0A0A0AV44	Caspase-8; Belongs to the peptidase C14A family.	Caspase-10; Belongs to the peptidase C14A family.	0.840
N301_02460	N301_06639	A0A0A0AWC4	A0A0A0ASC8	Caspase-8; Belongs to the peptidase C14A family.	Bcl-2 homologous antagonist/killer.	0.451
N301_02460	N301_09910	A0A0A0AWC4	A0A0A0A0T4	Caspase-8; Belongs to the peptidase C14A family.	Receptor-interacting serine/threonine-protein kinase 2.	0.756
N301_02460	N301_14697	A0A0A0AWC4	A0A0A0A9Q1	Caspase-8; Belongs to the peptidase C14A family.	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	0.968
N301_03252	N301_14697	A0A0A0AG61	A0A0A0A9Q1	Delta(24)-sterol reductase.	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	0.482