45 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_11068	Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family. (3633 aa)
	N301_10983	T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family. (514 aa)
	N301_06320	CST complex subunit TEN1. (119 aa)
	N301_08629	Serine/threonine-protein kinase Nek2. (432 aa)
	N301_09246	DNA repair protein RAD50. (1312 aa)
	N301_14067	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2667 aa)
	N301_11960	Catenin beta-1. (777 aa)
	N301_10055	Homeobox-containing protein 1. (391 aa)
	N301_02299	Mitogen-activated protein kinase kinase kinase 4. (1546 aa)
	N301_10853	F-box only protein 4. (396 aa)
	N301_03164	CST complex subunit CTC1. (116 aa)
	N301_13847	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (549 aa)
	N301_04778	NAD-dependent protein deacetylase sirtuin-6. (336 aa)
	N301_08460	MAP kinase-activated protein kinase 5. (461 aa)
	N301_16619	Protein PML. (254 aa)
	N301_13279	Structure-specific endonuclease subunit SLX4. (225 aa)
	N301_13280	Structure-specific endonuclease subunit SLX4. (419 aa)
	N301_00381	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family. (506 aa)
	N301_00516	Putative ATP-dependent RNA helicase DHX36. (910 aa)
	N301_11322	PAP-associated domain-containing protein 5. (501 aa)
	N301_12368	Telomerase-binding protein EST1A. (1377 aa)
	N301_03398	ATP-dependent DNA helicase; Belongs to the helicase family. (362 aa)
	N301_10436	Protection of telomeres protein 1. (786 aa)
	N301_14366	Serine/threonine-protein phosphatase 1 regulatory subunit 10. (498 aa)
	N301_04659	Uncharacterized protein. (127 aa)
	N301_02937	M7GpppN-mRNA hydrolase. (419 aa)
	N301_13152	Poly [ADP-ribose] polymerase. (1148 aa)
	N301_13217	H/ACA ribonucleoprotein complex non-core subunit NAF1. (353 aa)
	N301_09614	Ubiquitin carboxyl-terminal hydrolase. (268 aa)
	N301_02330	Adrenocortical dysplasia protein. (343 aa)
	N301_00849	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family. (241 aa)
	N301_15065	Guanine nucleotide-binding protein-like 3. (556 aa)
	N301_06058	Coiled-coil domain-containing protein 174. (455 aa)
	N301_15864	Nuclear factor related to kappa-B-binding protein. (1306 aa)
	N301_06030	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (409 aa)
	N301_02495	INO80 complex subunit D. (924 aa)
	N301_11352	Exosome component 10. (854 aa)
	N301_10634	Poly [ADP-ribose] polymerase. (1100 aa)
	N301_02757	Regulator of nonsense transcripts 1. (1054 aa)
	N301_01480	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family. (534 aa)
	N301_09007	PIN2/TERF1-interacting telomerase inhibitor 1. (188 aa)
	N301_11094	DNA repair endonuclease XPF. (846 aa)
	N301_09588	X-ray repair cross-complementing protein 5. (697 aa)
	N301_11096	Poly(A)-specific ribonuclease PARN. (545 aa)
	N301_01151	N-acetyltransferase 10. (984 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00381	N301_00849	A0A0A0AE91	A0A0A0AYE7	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	0.999
N301_00381	N301_01151	A0A0A0AE91	A0A0A0AK69	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	N-acetyltransferase 10.	0.430
N301_00381	N301_01480	A0A0A0AE91	A0A0A0APR9	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.999
N301_00381	N301_06030	A0A0A0AE91	A0A0A0AVJ4	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.726
N301_00381	N301_10983	A0A0A0AE91	A0A0A0AJ08	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family.	0.999
N301_00516	N301_01151	A0A0A0AF48	A0A0A0AK69	Putative ATP-dependent RNA helicase DHX36.	N-acetyltransferase 10.	0.477
N301_00516	N301_11352	A0A0A0AF48	A0A0A0ATR3	Putative ATP-dependent RNA helicase DHX36.	Exosome component 10.	0.711
N301_00516	N301_14366	A0A0A0AF48	A0A0A0AIM2	Putative ATP-dependent RNA helicase DHX36.	Serine/threonine-protein phosphatase 1 regulatory subunit 10.	0.444
N301_00849	N301_00381	A0A0A0AYE7	A0A0A0AE91	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	0.999
N301_00849	N301_01480	A0A0A0AYE7	A0A0A0APR9	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.999
N301_00849	N301_06030	A0A0A0AYE7	A0A0A0AVJ4	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.401
N301_00849	N301_10983	A0A0A0AYE7	A0A0A0AJ08	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family.	0.999
N301_01151	N301_00381	A0A0A0AK69	A0A0A0AE91	N-acetyltransferase 10.	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	0.430
N301_01151	N301_00516	A0A0A0AK69	A0A0A0AF48	N-acetyltransferase 10.	Putative ATP-dependent RNA helicase DHX36.	0.477
N301_01151	N301_01480	A0A0A0AK69	A0A0A0APR9	N-acetyltransferase 10.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.430
N301_01151	N301_11352	A0A0A0AK69	A0A0A0ATR3	N-acetyltransferase 10.	Exosome component 10.	0.617
N301_01151	N301_13217	A0A0A0AK69	A0A0A0B076	N-acetyltransferase 10.	H/ACA ribonucleoprotein complex non-core subunit NAF1.	0.540
N301_01151	N301_15065	A0A0A0AK69	A0A0A0AWG4	N-acetyltransferase 10.	Guanine nucleotide-binding protein-like 3.	0.948
N301_01480	N301_00381	A0A0A0APR9	A0A0A0AE91	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	0.999
N301_01480	N301_00849	A0A0A0APR9	A0A0A0AYE7	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	0.999