25 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_03398	ATP-dependent DNA helicase; Belongs to the helicase family. (362 aa)
	N301_06320	CST complex subunit TEN1. (119 aa)
	N301_08629	Serine/threonine-protein kinase Nek2. (432 aa)
	N301_14067	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2667 aa)
	N301_11960	Catenin beta-1. (777 aa)
	N301_10055	Homeobox-containing protein 1. (391 aa)
	N301_02299	Mitogen-activated protein kinase kinase kinase 4. (1546 aa)
	N301_10853	F-box only protein 4. (396 aa)
	N301_03164	CST complex subunit CTC1. (116 aa)
	N301_10983	T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family. (514 aa)
	N301_01151	N-acetyltransferase 10. (984 aa)
	N301_11096	Poly(A)-specific ribonuclease PARN. (545 aa)
	N301_09588	X-ray repair cross-complementing protein 5. (697 aa)
	N301_09007	PIN2/TERF1-interacting telomerase inhibitor 1. (188 aa)
	N301_01480	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family. (534 aa)
	N301_11352	Exosome component 10. (854 aa)
	N301_06058	Coiled-coil domain-containing protein 174. (455 aa)
	N301_00849	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family. (241 aa)
	N301_02330	Adrenocortical dysplasia protein. (343 aa)
	N301_13152	Poly [ADP-ribose] polymerase. (1148 aa)
	N301_02937	M7GpppN-mRNA hydrolase. (419 aa)
	N301_08460	MAP kinase-activated protein kinase 5. (461 aa)
	N301_00381	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family. (506 aa)
	N301_11322	PAP-associated domain-containing protein 5. (501 aa)
	N301_10436	Protection of telomeres protein 1. (786 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00381	N301_00849	A0A0A0AE91	A0A0A0AYE7	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	0.999
N301_00381	N301_01151	A0A0A0AE91	A0A0A0AK69	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	N-acetyltransferase 10.	0.430
N301_00381	N301_01480	A0A0A0AE91	A0A0A0APR9	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.999
N301_00381	N301_10983	A0A0A0AE91	A0A0A0AJ08	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family.	0.999
N301_00849	N301_00381	A0A0A0AYE7	A0A0A0AE91	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	0.999
N301_00849	N301_01480	A0A0A0AYE7	A0A0A0APR9	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.999
N301_00849	N301_10983	A0A0A0AYE7	A0A0A0AJ08	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family.	0.999
N301_01151	N301_00381	A0A0A0AK69	A0A0A0AE91	N-acetyltransferase 10.	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	0.430
N301_01151	N301_01480	A0A0A0AK69	A0A0A0APR9	N-acetyltransferase 10.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.430
N301_01151	N301_11352	A0A0A0AK69	A0A0A0ATR3	N-acetyltransferase 10.	Exosome component 10.	0.617
N301_01480	N301_00381	A0A0A0APR9	A0A0A0AE91	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	0.999
N301_01480	N301_00849	A0A0A0APR9	A0A0A0AYE7	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	0.999
N301_01480	N301_01151	A0A0A0APR9	A0A0A0AK69	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	N-acetyltransferase 10.	0.430
N301_01480	N301_10983	A0A0A0APR9	A0A0A0AJ08	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family.	0.999
N301_02330	N301_03164	A0A0A0AZ25	A0A0A0A4S2	Adrenocortical dysplasia protein.	CST complex subunit CTC1.	0.664
N301_02330	N301_06320	A0A0A0AZ25	A0A099ZUW9	Adrenocortical dysplasia protein.	CST complex subunit TEN1.	0.736
N301_02330	N301_10436	A0A0A0AZ25	A0A0A0AGL5	Adrenocortical dysplasia protein.	Protection of telomeres protein 1.	0.988
N301_02937	N301_11096	A0A0A0B4Q6	A0A0A0AL08	M7GpppN-mRNA hydrolase.	Poly(A)-specific ribonuclease PARN.	0.768
N301_02937	N301_11352	A0A0A0B4Q6	A0A0A0ATR3	M7GpppN-mRNA hydrolase.	Exosome component 10.	0.492
N301_02937	N301_11960	A0A0A0B4Q6	A0A0A0A1M4	M7GpppN-mRNA hydrolase.	Catenin beta-1.	0.477