STRINGSTRING
N301_08207 N301_08207 N301_12288 N301_12288 N301_12849 N301_12849 N301_10585 N301_10585 N301_08206 N301_08206 N301_11774 N301_11774 N301_14323 N301_14323 N301_10939 N301_10939 N301_07280 N301_07280 N301_16777 N301_16777 N301_01642 N301_01642 N301_10383 N301_10383 N301_10384 N301_10384 N301_09431 N301_09431 N301_12290 N301_12290 N301_11431 N301_11431 N301_09195 N301_09195 N301_10098 N301_10098 N301_07464 N301_07464 N301_15014 N301_15014 N301_04810 N301_04810 N301_04441 N301_04441 N301_01186 N301_01186
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_08207Protein unc-13 C. (2160 aa)
N301_12288Zinc finger ZZ-type and EF-hand domain-containing protein 1. (2807 aa)
N301_12849Glutamate receptor ionotropic, kainate 3. (884 aa)
N301_10585Voltage-dependent L-type calcium channel subunit beta-4. (424 aa)
N301_08206Protein unc-13 A. (110 aa)
N301_11774Cadherin-8; Cadherins are calcium-dependent cell adhesion proteins. (709 aa)
N301_14323Uncharacterized protein C4orf22. (167 aa)
N301_10939Beta-soluble NSF attachment protein. (262 aa)
N301_07280Glutamate receptor ionotropic, delta-2. (52 aa)
N301_16777E3 ubiquitin-protein ligase parkin. (255 aa)
N301_01642Glutamate receptor ionotropic, kainate 2. (871 aa)
N301_10383Glutamate receptor ionotropic, delta-1. (767 aa)
N301_10384Glutamate receptor ionotropic, delta-1. (52 aa)
N301_09431Neuropeptide S. (97 aa)
N301_12290P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (389 aa)
N301_11431Putative glutamate receptor; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (486 aa)
N301_09195Protein unc-13 B. (110 aa)
N301_10098Glutamate receptor ionotropic, delta-2. (493 aa)
N301_07464Calsyntenin-3. (955 aa)
N301_15014Glutamate receptor ionotropic, kainate 4. (850 aa)
N301_04810Glutamate receptor ionotropic, kainate 1. (819 aa)
N301_04441Alpha-soluble NSF attachment protein. (190 aa)
N301_01186Vesicular glutamate transporter 2. (581 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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