22 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_08207	Protein unc-13 C. (2160 aa)
	N301_08423	p2X purinoceptor 4. (335 aa)
	N301_04801	Synaptojanin-1. (1603 aa)
	N301_08033	Glucagon family neuropeptides. (102 aa)
	N301_06789	Cytoplasmic FMR1-interacting protein 1. (1252 aa)
	N301_12266	Leucine-rich repeat serine/threonine-protein kinase 2. (2493 aa)
	N301_04523	Secretagogin. (245 aa)
	N301_08206	Protein unc-13 A. (110 aa)
	N301_15939	Rho GTPase-activating protein 42. (715 aa)
	N301_09195	Protein unc-13 B. (110 aa)
	N301_15843	Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family. (647 aa)
	N301_07615	Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family. (634 aa)
	N301_02655	Calbindin. (235 aa)
	N301_01834	AP2-associated protein kinase 1. (722 aa)
	N301_09729	Tenascin-N. (1034 aa)
	N301_01836	Uncharacterized protein FLJ45252. (361 aa)
	N301_10400	Putative vesicular acetylcholine transporter-A. (269 aa)
	N301_07074	Synaptic vesicular amine transporter. (485 aa)
	N301_14927	Complexin-4. (160 aa)
	N301_11283	Oligophrenin-1. (723 aa)
	N301_00670	Chromaffin granule amine transporter. (486 aa)
	N301_16702	Calretinin. (145 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00670	N301_07074	A0A0A0AE25	A0A0A0AC39	Chromaffin granule amine transporter.	Synaptic vesicular amine transporter.	0.826
N301_00670	N301_08206	A0A0A0AE25	A0A0A0AK66	Chromaffin granule amine transporter.	Protein unc-13 A.	0.576
N301_00670	N301_08207	A0A0A0AE25	A0A0A0AHC5	Chromaffin granule amine transporter.	Protein unc-13 C.	0.576
N301_00670	N301_09195	A0A0A0AE25	A0A0A0ASW9	Chromaffin granule amine transporter.	Protein unc-13 B.	0.576
N301_01834	N301_01836	A0A0A0AYL2	A0A0A0B0F2	AP2-associated protein kinase 1.	Uncharacterized protein FLJ45252.	0.640
N301_01836	N301_01834	A0A0A0B0F2	A0A0A0AYL2	Uncharacterized protein FLJ45252.	AP2-associated protein kinase 1.	0.640
N301_07074	N301_00670	A0A0A0AC39	A0A0A0AE25	Synaptic vesicular amine transporter.	Chromaffin granule amine transporter.	0.826
N301_07074	N301_08206	A0A0A0AC39	A0A0A0AK66	Synaptic vesicular amine transporter.	Protein unc-13 A.	0.576
N301_07074	N301_08207	A0A0A0AC39	A0A0A0AHC5	Synaptic vesicular amine transporter.	Protein unc-13 C.	0.576
N301_07074	N301_09195	A0A0A0AC39	A0A0A0ASW9	Synaptic vesicular amine transporter.	Protein unc-13 B.	0.576
N301_08206	N301_00670	A0A0A0AK66	A0A0A0AE25	Protein unc-13 A.	Chromaffin granule amine transporter.	0.576
N301_08206	N301_07074	A0A0A0AK66	A0A0A0AC39	Protein unc-13 A.	Synaptic vesicular amine transporter.	0.576
N301_08206	N301_08207	A0A0A0AK66	A0A0A0AHC5	Protein unc-13 A.	Protein unc-13 C.	0.907
N301_08206	N301_10400	A0A0A0AK66	A0A0A0B1N0	Protein unc-13 A.	Putative vesicular acetylcholine transporter-A.	0.688
N301_08207	N301_00670	A0A0A0AHC5	A0A0A0AE25	Protein unc-13 C.	Chromaffin granule amine transporter.	0.576
N301_08207	N301_07074	A0A0A0AHC5	A0A0A0AC39	Protein unc-13 C.	Synaptic vesicular amine transporter.	0.576
N301_08207	N301_08206	A0A0A0AHC5	A0A0A0AK66	Protein unc-13 C.	Protein unc-13 A.	0.907
N301_08207	N301_09195	A0A0A0AHC5	A0A0A0ASW9	Protein unc-13 C.	Protein unc-13 B.	0.900
N301_08207	N301_10400	A0A0A0AHC5	A0A0A0B1N0	Protein unc-13 C.	Putative vesicular acetylcholine transporter-A.	0.688
N301_09195	N301_00670	A0A0A0ASW9	A0A0A0AE25	Protein unc-13 B.	Chromaffin granule amine transporter.	0.576