28 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_14258	Homer protein 1. (97 aa)
	N301_06333	ATP-dependent DNA helicase Q5. (1007 aa)
	N301_07450	Taste receptor type 2. (280 aa)
	N301_10862	Non-specific serine/threonine protein kinase. (517 aa)
	N301_08068	Voltage-dependent calcium channel gamma-4 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs), including GRIA1 and GRIA4. Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (259 aa)
	N301_03188	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (406 aa)
	N301_05374	Metabotropic glutamate receptor 2. (769 aa)
	N301_05511	DNA repair-scaffolding protein. (205 aa)
	N301_05512	DNA repair-scaffolding protein. (658 aa)
	N301_04744	Adenylate cyclase type 8; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (946 aa)
	N301_02268	D(2) dopamine receptor; Belongs to the G-protein coupled receptor 1 family. (457 aa)
	N301_15992	Amino acid transporter. (424 aa)
	N301_16544	Ubiquitin-protein ligase E3A. (858 aa)
	N301_01057	Homer protein 1. (266 aa)
	N301_14932	Neuroendocrine convertase 1; Belongs to the peptidase S8 family. (680 aa)
	N301_09503	Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family. (81 aa)
	N301_04099	Homer protein 1. (363 aa)
	N301_04115	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family. (322 aa)
	N301_15022	Ryanodine receptor 3. (174 aa)
	N301_15023	Ryanodine receptor 3. (108 aa)
	N301_12370	Serine racemase. (280 aa)
	N301_13119	Trimeric intracellular cation channel type B. (251 aa)
	N301_12555	Caspase-6; Belongs to the peptidase C14A family. (294 aa)
	N301_09122	Homer protein 2. (361 aa)
	N301_03888	Mu-type opioid receptor; Belongs to the G-protein coupled receptor 1 family. (291 aa)
	N301_02064	Ryanodine receptor 3. (4326 aa)
	N301_14226	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (598 aa)
	N301_00449	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00449	N301_06333	A0A0A0AZ45	A0A099ZZ38	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	ATP-dependent DNA helicase Q5.	0.814
N301_00449	N301_10862	A0A0A0AZ45	A0A0A0A120	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	Non-specific serine/threonine protein kinase.	0.436
N301_01057	N301_05374	A0A0A0ACC6	A0A0A0A663	Homer protein 1.	Metabotropic glutamate receptor 2.	0.483
N301_01057	N301_09122	A0A0A0ACC6	A0A0A0AMG3	Homer protein 1.	Homer protein 2.	0.689
N301_01057	N301_14258	A0A0A0ACC6	A0A0A0B173	Homer protein 1.	Homer protein 1.	0.796
N301_02064	N301_03188	A0A0A0AP67	A0A0A0A3C4	Ryanodine receptor 3.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.786
N301_02064	N301_15022	A0A0A0AP67	A0A0A0AII5	Ryanodine receptor 3.	Ryanodine receptor 3.	0.943
N301_02064	N301_15023	A0A0A0AP67	A0A0A0AJS5	Ryanodine receptor 3.	Ryanodine receptor 3.	0.924
N301_03188	N301_02064	A0A0A0A3C4	A0A0A0AP67	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Ryanodine receptor 3.	0.786
N301_03188	N301_15022	A0A0A0A3C4	A0A0A0AII5	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Ryanodine receptor 3.	0.786
N301_03188	N301_15023	A0A0A0A3C4	A0A0A0AJS5	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Ryanodine receptor 3.	0.786
N301_04099	N301_05374	A0A0A0AHZ9	A0A0A0A663	Homer protein 1.	Metabotropic glutamate receptor 2.	0.483
N301_04099	N301_09122	A0A0A0AHZ9	A0A0A0AMG3	Homer protein 1.	Homer protein 2.	0.695
N301_05374	N301_01057	A0A0A0A663	A0A0A0ACC6	Metabotropic glutamate receptor 2.	Homer protein 1.	0.483
N301_05374	N301_04099	A0A0A0A663	A0A0A0AHZ9	Metabotropic glutamate receptor 2.	Homer protein 1.	0.483
N301_05374	N301_07450	A0A0A0A663	A0A099ZZD2	Metabotropic glutamate receptor 2.	Taste receptor type 2.	0.595
N301_05374	N301_09122	A0A0A0A663	A0A0A0AMG3	Metabotropic glutamate receptor 2.	Homer protein 2.	0.545
N301_05374	N301_14258	A0A0A0A663	A0A0A0B173	Metabotropic glutamate receptor 2.	Homer protein 1.	0.483
N301_05511	N301_05512	A0A0A0A7P1	A0A0A0A866	DNA repair-scaffolding protein.	DNA repair-scaffolding protein.	0.870
N301_05511	N301_06333	A0A0A0A7P1	A0A099ZZ38	DNA repair-scaffolding protein.	ATP-dependent DNA helicase Q5.	0.498