9 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_03029	Uncharacterized protein C12orf4. (549 aa)
	N301_13957	Tyrosine-protein kinase. (626 aa)
	N301_15368	Tyrosine-protein kinase. (513 aa)
	N301_09539	Sorting nexin-4. (402 aa)
	N301_08999	Tyrosine-protein kinase. (418 aa)
	N301_12349	Rab5 GDP/GTP exchange factor. (491 aa)
	N301_01820	Protein kinase domain-containing protein. (52 aa)
	N301_15425	Adenosine receptor A2; Receptor for adenosine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Belongs to the G-protein coupled receptor 1 family. (340 aa)
	N301_06776	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily. (822 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_01820	N301_08999	A0A0A0AF98	A0A0A0AMH2	Protein kinase domain-containing protein.	Tyrosine-protein kinase.	0.608
N301_01820	N301_15368	A0A0A0AF98	A0A0A0AZZ7	Protein kinase domain-containing protein.	Tyrosine-protein kinase.	0.563
N301_06776	N301_08999	A0A0A0A4N8	A0A0A0AMH2	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.	Tyrosine-protein kinase.	0.592
N301_06776	N301_15368	A0A0A0A4N8	A0A0A0AZZ7	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.	Tyrosine-protein kinase.	0.563
N301_08999	N301_01820	A0A0A0AMH2	A0A0A0AF98	Tyrosine-protein kinase.	Protein kinase domain-containing protein.	0.608
N301_08999	N301_06776	A0A0A0AMH2	A0A0A0A4N8	Tyrosine-protein kinase.	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.	0.592
N301_08999	N301_13957	A0A0A0AMH2	A0A0A0B196	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.660
N301_13957	N301_08999	A0A0A0B196	A0A0A0AMH2	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.660
N301_13957	N301_15368	A0A0A0B196	A0A0A0AZZ7	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.956
N301_15368	N301_01820	A0A0A0AZZ7	A0A0A0AF98	Tyrosine-protein kinase.	Protein kinase domain-containing protein.	0.563
N301_15368	N301_06776	A0A0A0AZZ7	A0A0A0A4N8	Tyrosine-protein kinase.	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.	0.563
N301_15368	N301_13957	A0A0A0AZZ7	A0A0A0B196	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.956