12 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_07360	Trefoil factor 2. (126 aa)
	N301_07468	Lysophospholipid acyltransferase 5; Belongs to the membrane-bound acyltransferase family. (447 aa)
	N301_03716	Apolipoprotein A-I. (250 aa)
	N301_16314	Potassium voltage-gated channel subfamily KQT member 1. (82 aa)
	N301_04450	ATP-binding cassette sub-family G member 5. (645 aa)
	N301_05944	Ectonucleotide pyrophosphatase/phosphodiesterase family member 7. (411 aa)
	N301_00973	Oxysterols receptor LXR-alpha. (409 aa)
	N301_00261	Aquaporin-1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
	N301_08414	Huntingtin-interacting protein 1-related protein. (891 aa)
	N301_04451	ATP-binding cassette sub-family G member 8. (648 aa)
	N301_08785	Kappa-type opioid receptor; Belongs to the G-protein coupled receptor 1 family. (303 aa)
	N301_03991	Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family. (384 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00973	N301_04450	A0A0A0A677	A0A0A0A506	Oxysterols receptor LXR-alpha.	ATP-binding cassette sub-family G member 5.	0.508
N301_00973	N301_04451	A0A0A0A677	A0A0A0A9Q7	Oxysterols receptor LXR-alpha.	ATP-binding cassette sub-family G member 8.	0.495
N301_03716	N301_04450	A0A0A0A3R1	A0A0A0A506	Apolipoprotein A-I.	ATP-binding cassette sub-family G member 5.	0.692
N301_03716	N301_04451	A0A0A0A3R1	A0A0A0A9Q7	Apolipoprotein A-I.	ATP-binding cassette sub-family G member 8.	0.657
N301_04450	N301_00973	A0A0A0A506	A0A0A0A677	ATP-binding cassette sub-family G member 5.	Oxysterols receptor LXR-alpha.	0.508
N301_04450	N301_03716	A0A0A0A506	A0A0A0A3R1	ATP-binding cassette sub-family G member 5.	Apolipoprotein A-I.	0.692
N301_04450	N301_04451	A0A0A0A506	A0A0A0A9Q7	ATP-binding cassette sub-family G member 5.	ATP-binding cassette sub-family G member 8.	0.999
N301_04451	N301_00973	A0A0A0A9Q7	A0A0A0A677	ATP-binding cassette sub-family G member 8.	Oxysterols receptor LXR-alpha.	0.495
N301_04451	N301_03716	A0A0A0A9Q7	A0A0A0A3R1	ATP-binding cassette sub-family G member 8.	Apolipoprotein A-I.	0.657
N301_04451	N301_04450	A0A0A0A9Q7	A0A0A0A506	ATP-binding cassette sub-family G member 8.	ATP-binding cassette sub-family G member 5.	0.999