46 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_12858	Type II inositol 1,4,5-trisphosphate 5-phosphatase. (706 aa)
	N301_16333	Synaptotagmin-11. (418 aa)
	N301_04373	Ras-related protein Rab-11A. (209 aa)
	N301_02322	Ras-related protein Rab-32. (160 aa)
	N301_00985	Activating molecule in BECN1-regulated autophagy protein 1. (1300 aa)
	N301_14787	Nucleotide-binding oligomerization domain-containing protein 1. (927 aa)
	N301_15829	Inositol polyphosphate 5-phosphatase OCRL-1. (855 aa)
	N301_11694	Ras-related protein Rab-9A. (201 aa)
	N301_11996	DCC-interacting protein 13-alpha. (690 aa)
	N301_08733	Ras-related protein Rab-23. (237 aa)
	N301_14579	Ras-related protein Rab-11B. (205 aa)
	N301_13020	Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
	N301_11822	Rab11 family-interacting protein 5. (526 aa)
	N301_00138	Ras-related protein Rab-38. (212 aa)
	N301_12247	Syntaxin-8. (211 aa)
	N301_01234	Natural resistance-associated macrophage protein 2. (477 aa)
	N301_00660	Rab11 family-interacting protein 1. (514 aa)
	N301_03526	Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (573 aa)
	N301_15294	Vesicle-associated membrane protein 3. (97 aa)
	N301_10951	Toll-like receptor 2 type-1. (874 aa)
	N301_14089	Annexin. (502 aa)
	N301_12937	Ovalbumin; Belongs to the serpin family. (229 aa)
	N301_14182	1-phosphatidylinositol 3-phosphate 5-kinase. (1500 aa)
	N301_06585	Ras-related protein Rab-7b. (107 aa)
	N301_14012	Ras-related protein Rab-31. (182 aa)
	N301_13951	Ras-related protein Rab-10. (159 aa)
	N301_11351	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2517 aa)
	N301_14422	Ras-related protein Rab-9B. (201 aa)
	N301_14810	Cell division control protein 42. (163 aa)
	N301_15536	Ras-related protein Rab-7a. (207 aa)
	N301_01599	Signaling lymphocytic activation molecule. (229 aa)
	N301_15853	Vacuolar protein sorting-associated protein 26B. (336 aa)
	N301_15782	Phospholipase A(2). (59 aa)
	N301_13059	UV radiation resistance-associated gene protein. (658 aa)
	N301_05290	Ras-related protein Rab-20. (173 aa)
	N301_01292	Ras-related protein Rab-39A. (142 aa)
	N301_01215	Ras-related protein Rab-11A. (216 aa)
	N301_16771	DCC-interacting protein 13-beta. (465 aa)
	N301_09697	Syntaxin-6; Belongs to the syntaxin family. (239 aa)
	N301_13336	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family. (859 aa)
	N301_05273	Lysosome-associated membrane glycoprotein 1. (406 aa)
	N301_06271	Ras-related protein Rab-22A. (182 aa)
	N301_12498	Ras-related protein Rab-14. (215 aa)
	N301_02651	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (225 aa)
	N301_13957	Tyrosine-protein kinase. (626 aa)
	N301_11664	Beclin 1-associated autophagy-related key regulator. (421 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00660	N301_01215	A0A0A0AE15	A0A0A0AX51	Rab11 family-interacting protein 1.	Ras-related protein Rab-11A.	0.938
N301_00660	N301_04373	A0A0A0AE15	A0A099ZWJ7	Rab11 family-interacting protein 1.	Ras-related protein Rab-11A.	0.938
N301_00660	N301_11822	A0A0A0AE15	A0A0A0A7S8	Rab11 family-interacting protein 1.	Rab11 family-interacting protein 5.	0.871
N301_00660	N301_14579	A0A0A0AE15	A0A0A0A6W1	Rab11 family-interacting protein 1.	Ras-related protein Rab-11B.	0.955
N301_00985	N301_11664	A0A0A0A3J3	A0A0A0B537	Activating molecule in BECN1-regulated autophagy protein 1.	Beclin 1-associated autophagy-related key regulator.	0.927
N301_00985	N301_13059	A0A0A0A3J3	A0A0A0AWE8	Activating molecule in BECN1-regulated autophagy protein 1.	UV radiation resistance-associated gene protein.	0.605
N301_00985	N301_13336	A0A0A0A3J3	A0A0A0AYF8	Activating molecule in BECN1-regulated autophagy protein 1.	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.	0.940
N301_01215	N301_00660	A0A0A0AX51	A0A0A0AE15	Ras-related protein Rab-11A.	Rab11 family-interacting protein 1.	0.938
N301_01215	N301_05290	A0A0A0AX51	A0A0A0AWS7	Ras-related protein Rab-11A.	Ras-related protein Rab-20.	0.492
N301_01215	N301_06271	A0A0A0AX51	A0A0A0AZV6	Ras-related protein Rab-11A.	Ras-related protein Rab-22A.	0.521
N301_01215	N301_09697	A0A0A0AX51	A0A0A0AYF5	Ras-related protein Rab-11A.	Syntaxin-6; Belongs to the syntaxin family.	0.449
N301_01215	N301_11351	A0A0A0AX51	A0A0A0ASR0	Ras-related protein Rab-11A.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.481
N301_01215	N301_11694	A0A0A0AX51	A0A0A0A537	Ras-related protein Rab-11A.	Ras-related protein Rab-9A.	0.601
N301_01215	N301_11822	A0A0A0AX51	A0A0A0A7S8	Ras-related protein Rab-11A.	Rab11 family-interacting protein 5.	0.909
N301_01215	N301_11996	A0A0A0AX51	A0A0A0A6B2	Ras-related protein Rab-11A.	DCC-interacting protein 13-alpha.	0.683
N301_01215	N301_12498	A0A0A0AX51	A0A0A0B008	Ras-related protein Rab-11A.	Ras-related protein Rab-14.	0.545
N301_01215	N301_13020	A0A0A0AX51	A0A0A0A7D4	Ras-related protein Rab-11A.	Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.	0.527
N301_01215	N301_13951	A0A0A0AX51	A0A0A0ASJ9	Ras-related protein Rab-11A.	Ras-related protein Rab-10.	0.658
N301_01215	N301_14012	A0A0A0AX51	A0A0A0ARR9	Ras-related protein Rab-11A.	Ras-related protein Rab-31.	0.518
N301_01215	N301_14422	A0A0A0AX51	A0A0A0AT10	Ras-related protein Rab-11A.	Ras-related protein Rab-9B.	0.598