57 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_06667	Protein GREB1. (1940 aa)
	N301_06109	Transcription factor AP-2 gamma. (274 aa)
	N301_16789	Crk-like. (299 aa)
	N301_06176	TBC1 domain family member 20. (379 aa)
	N301_04357	Leucine-rich repeat-containing G-protein coupled receptor 4. (730 aa)
	N301_04339	Uncharacterized protein. (291 aa)
	N301_03672	Peroxiredoxin-4. (176 aa)
	N301_10041	Eukaryotic translation initiation factor 2 subunit 2. (331 aa)
	N301_14350	Collagen alpha-1(VI) chain. (1013 aa)
	N301_00075	Splicing factor 1. (91 aa)
	N301_15237	AT-rich interactive domain-containing protein 4B. (1313 aa)
	N301_02799	Sphingosine-1-phosphate lyase 1. (559 aa)
	N301_04353	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (868 aa)
	N301_11477	Inhibitor of growth protein. (220 aa)
	N301_08949	Fanconi anemia group A protein. (1417 aa)
	N301_16734	Inhibin beta A chain. (424 aa)
	N301_14445	Mastermind-like domain-containing protein 1. (975 aa)
	N301_13455	WD repeat-containing protein 48. (641 aa)
	N301_09163	Homeobox protein Hox-A10. (297 aa)
	N301_04179	Nuclear receptor subfamily 0 group B member 2. (257 aa)
	N301_06721	Transcription factor SOX-8. (139 aa)
	N301_09164	Homeobox protein Hox-A11. (270 aa)
	N301_10812	GREB1-like. (1941 aa)
	N301_08899	S phase cyclin A-associated protein in the endoplasmic reticulum. (1402 aa)
	N301_15177	Uncharacterized protein. (167 aa)
	N301_09358	Bone morphogenetic protein 6. (296 aa)
	N301_05785	Ankyrin repeat and SOCS box protein 1. (272 aa)
	N301_11861	Pre-mRNA 3'-end-processing factor FIP1. (489 aa)
	N301_00581	Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family. (257 aa)
	N301_01917	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (938 aa)
	N301_08862	AT-rich interactive domain-containing protein 4A. (1200 aa)
	N301_00396	3-oxo-5-alpha-steroid 4-dehydrogenase 1. (145 aa)
	N301_03252	Delta(24)-sterol reductase. (440 aa)
	N301_14935	Rho-related BTB domain-containing protein 3. (601 aa)
	N301_08158	TATA element modulatory factor. (1053 aa)
	N301_07945	GATA-binding factor 3. (444 aa)
	N301_04152	Duplex and mab-3 related transcription factor 3. (322 aa)
	N301_04105	Lipoma HMGIC fusion partner-like 2 protein. (228 aa)
	N301_01246	Homeobox protein Hox-C11a. (280 aa)
	N301_04491	Mothers against decapentaplegic homolog. (546 aa)
	N301_11257	Testis-expressed sequence 11 protein. (841 aa)
	N301_07064	GDNF family receptor alpha-1. (304 aa)
	N301_06555	Fibronectin type-III domain-containing protein 3a. (1199 aa)
	N301_02243	High mobility group protein B2. (158 aa)
	N301_11284	Androgen receptor. (382 aa)
	N301_13679	3-oxo-5-alpha-steroid 4-dehydrogenase 2. (163 aa)
	N301_11920	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (438 aa)
	N301_15627	Transcription factor 21. (150 aa)
	N301_04659	Uncharacterized protein. (127 aa)
	N301_03059	Homeobox protein Hox-D13. (83 aa)
	N301_10104	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (876 aa)
	N301_16147	Lysine-specific demethylase 5A. (1636 aa)
	N301_11960	Catenin beta-1. (777 aa)
	LHCGR	Lutropin-choriogonadotropic hormone receptor; Receptor for lutropin-choriogonadotropic hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily. (661 aa)
	N301_02306	Proto-oncogene Mas; Belongs to the G-protein coupled receptor 1 family. (329 aa)
	N301_06440	Transforming growth factor beta; Belongs to the TGF-beta family. (412 aa)
	N301_14656	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (192 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LHCGR	N301_04357	A0A0A0A1F5	A0A0A0B0V4	Lutropin-choriogonadotropic hormone receptor; Receptor for lutropin-choriogonadotropic hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily.	Leucine-rich repeat-containing G-protein coupled receptor 4.	0.642
LHCGR	N301_08949	A0A0A0A1F5	A0A0A0AVH2	Lutropin-choriogonadotropic hormone receptor; Receptor for lutropin-choriogonadotropic hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily.	Fanconi anemia group A protein.	0.586
LHCGR	N301_10104	A0A0A0A1F5	A0A0A0A2Z0	Lutropin-choriogonadotropic hormone receptor; Receptor for lutropin-choriogonadotropic hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.463
N301_00396	N301_13679	A0A0A0AGX4	A0A0A0A6E9	3-oxo-5-alpha-steroid 4-dehydrogenase 1.	3-oxo-5-alpha-steroid 4-dehydrogenase 2.	0.829
N301_01917	N301_07064	A0A0A0AIG7	A0A0A0AC31	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	GDNF family receptor alpha-1.	0.575
N301_01917	N301_11960	A0A0A0AIG7	A0A0A0A1M4	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Catenin beta-1.	0.406
N301_01917	N301_14656	A0A0A0AIG7	A0A099ZYL3	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.889
N301_01917	N301_16789	A0A0A0AIG7	A0A0A0B3C0	Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Crk-like.	0.908
N301_02243	N301_08862	A0A0A0AA74	A0A0A0AH02	High mobility group protein B2.	AT-rich interactive domain-containing protein 4A.	0.664
N301_02243	N301_15237	A0A0A0AA74	A0A0A0AYF9	High mobility group protein B2.	AT-rich interactive domain-containing protein 4B.	0.664
N301_03252	N301_08862	A0A0A0AG61	A0A0A0AH02	Delta(24)-sterol reductase.	AT-rich interactive domain-containing protein 4A.	0.452
N301_03252	N301_15237	A0A0A0AG61	A0A0A0AYF9	Delta(24)-sterol reductase.	AT-rich interactive domain-containing protein 4B.	0.452
N301_03252	N301_16147	A0A0A0AG61	A0A0A0A2K9	Delta(24)-sterol reductase.	Lysine-specific demethylase 5A.	0.418
N301_03672	N301_07945	A0A0A0B0L1	A0A0A0AF25	Peroxiredoxin-4.	GATA-binding factor 3.	0.407
N301_04179	N301_04339	A0A0A0AP26	A0A0A0B0U0	Nuclear receptor subfamily 0 group B member 2.	Uncharacterized protein.	0.545
N301_04179	N301_11284	A0A0A0AP26	A0A0A0A8B6	Nuclear receptor subfamily 0 group B member 2.	Androgen receptor.	0.531
N301_04339	N301_04179	A0A0A0B0U0	A0A0A0AP26	Uncharacterized protein.	Nuclear receptor subfamily 0 group B member 2.	0.545
N301_04339	N301_06721	A0A0A0B0U0	A0A0A0ANS2	Uncharacterized protein.	Transcription factor SOX-8.	0.589
N301_04339	N301_08862	A0A0A0B0U0	A0A0A0AH02	Uncharacterized protein.	AT-rich interactive domain-containing protein 4A.	0.441
N301_04339	N301_15237	A0A0A0B0U0	A0A0A0AYF9	Uncharacterized protein.	AT-rich interactive domain-containing protein 4B.	0.441