STRINGSTRING
N301_11944 N301_11944 N301_16022 N301_16022 N301_02461 N301_02461 N301_14402 N301_14402 N301_10686 N301_10686 N301_16435 N301_16435 N301_10730 N301_10730 N301_11079 N301_11079 N301_02070 N301_02070 N301_04525 N301_04525 N301_09361 N301_09361 N301_09136 N301_09136 N301_09360 N301_09360 N301_08843 N301_08843 N301_10751 N301_10751 N301_04108 N301_04108 N301_15661 N301_15661 PAFAH1B1 PAFAH1B1 N301_12240 N301_12240 N301_01792 N301_01792 N301_11962 N301_11962
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_11944FYVE and coiled-coil domain-containing protein 1. (1493 aa)
N301_16022Huntingtin. (3065 aa)
N301_02461Trafficking kinesin-binding protein 2. (847 aa)
N301_14402SNARE-associated protein Snapin. (90 aa)
N301_10686Biogenesis of lysosome-related organelles complex 1 subunit 2. (117 aa)
N301_16435Bicaudal D-related protein 1. (378 aa)
N301_10730AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (388 aa)
N301_11079Nuclear distribution protein nudE 1. (344 aa)
N301_02070RAS guanyl-releasing protein 1. (776 aa)
N301_04525Biogenesis of lysosome-related organelles complex 1 subunit 4. (136 aa)
N301_09361Eukaryotic translation elongation factor 1 epsilon-1. (145 aa)
N301_09136Biogenesis of lysosome-related organelles complex 1 subunit 6. (115 aa)
N301_09360Biogenesis of lysosome-related organelles complex 1 subunit 5. (150 aa)
N301_08843AP-3 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family. (378 aa)
N301_10751Dysbindin. (332 aa)
N301_04108AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1030 aa)
N301_15661F-box/WD repeat-containing protein 11. (552 aa)
PAFAH1B1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
N301_12240Nuclear distribution protein nudE-like 1. (315 aa)
N301_01792AP-3 complex subunit beta-2. (1038 aa)
N301_11962Trafficking kinesin-binding protein 1. (961 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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