54 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_08040	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (176 aa)
	N301_13176	Transmembrane protein 131-like. (1564 aa)
	N301_12184	HLA class II histocompatibility antigen gamma chain. (217 aa)
	N301_15368	Tyrosine-protein kinase. (513 aa)
	N301_12511	Roquin-2. (1191 aa)
	N301_10044	E3 ubiquitin-protein ligase Itchy. (852 aa)
	N301_04272	Programmed cell death 1 ligand 1. (223 aa)
	N301_15320	Tumor necrosis factor receptor superfamily member 13B. (288 aa)
	N301_02504	Cytotoxic T-lymphocyte protein 4. (205 aa)
	N301_07170	T-lymphocyte activation antigen CD80. (257 aa)
	N301_04274	Programmed cell death 1 ligand 2. (210 aa)
	N301_13994	Tyrosine-protein phosphatase non-receptor type 2. (269 aa)
	N301_01349	Suppressor of cytokine signaling 1. (207 aa)
	N301_06579	Ras association domain-containing protein 5. (202 aa)
	N301_13964	Suppressor of cytokine signaling 6. (500 aa)
	N301_10809	THO complex subunit 1. (655 aa)
	N301_08999	Tyrosine-protein kinase. (418 aa)
	N301_01952	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1. (1177 aa)
	N301_12593	B-cell scaffold protein with ankyrin repeats. (381 aa)
	N301_10941	Tyrosine-protein kinase Mer. (937 aa)
	N301_11846	Annexin. (342 aa)
	N301_02824	Amine oxidase. (498 aa)
	N301_03462	Glomulin. (596 aa)
	N301_13448	Progesterone-induced-blocking factor 1. (747 aa)
	N301_04521	Protein FAM65B. (1076 aa)
	N301_12592	B-cell scaffold protein with ankyrin repeats. (167 aa)
	N301_09946	E3 ubiquitin-protein ligase MARCH7. (683 aa)
	N301_05487	Mothers against decapentaplegic 7. (180 aa)
	N301_05164	B-cell lymphoma 6 protein. (709 aa)
	N301_12029	Fibrinogen-like 1. (313 aa)
	N301_10241	SAM domain-containing protein SAMSN-1. (513 aa)
	N301_01718	Tumor necrosis factor alpha-induced protein 3. (788 aa)
	N301_07872	Fibroleukin. (442 aa)
	N301_08597	Arginase. (278 aa)
	N301_13249	Interleukin-20 receptor subunit beta. (295 aa)
	N301_04468	Suppressor of cytokine signaling 5. (536 aa)
	N301_16085	F-box only protein 7. (496 aa)
	N301_03163	V-set domain-containing T-cell activation inhibitor 1. (233 aa)
	N301_11156	Leucine-rich repeat-containing protein 32. (583 aa)
	N301_10069	Angiopoietin-4. (118 aa)
	N301_06474	Protein QNR-71. (540 aa)
	N301_08711	Leucine-rich repeat-containing protein 1. (472 aa)
	N301_12850	Ribonuclease ZC3H12A. (481 aa)
	N301_11110	Protein scribble. (459 aa)
	N301_07471	Tyrosine-protein phosphatase non-receptor type 6. (608 aa)
	N301_00709	Core-binding factor subunit beta. (115 aa)
	N301_08056	cAMP-dependent protein kinase type I-alpha regulatory subunit. (390 aa)
	N301_07481	Lymphocyte activation 3. (158 aa)
	N301_14912	E3 ubiquitin-protein ligase pellino 1. (442 aa)
	N301_07508	T-lymphocyte activation antigen CD86. (209 aa)
	N301_00300	Indian hedgehog protein. (308 aa)
	N301_09232	NEDD4 family-interacting protein 1. (201 aa)
	N301_10477	Mitotic spindle assembly checkpoint protein MAD1. (600 aa)
	N301_14843	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (148 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00300	N301_07481	A0A099ZZ53	A0A0A0A131	Indian hedgehog protein.	Lymphocyte activation 3.	0.408
N301_00709	N301_08999	A0A0A0A1I1	A0A0A0AMH2	Core-binding factor subunit beta.	Tyrosine-protein kinase.	0.505
N301_00709	N301_10044	A0A0A0A1I1	A0A0A0AYC5	Core-binding factor subunit beta.	E3 ubiquitin-protein ligase Itchy.	0.525
N301_00709	N301_15368	A0A0A0A1I1	A0A0A0AZZ7	Core-binding factor subunit beta.	Tyrosine-protein kinase.	0.505
N301_01349	N301_04468	A0A0A0AR25	A0A0A0A9S2	Suppressor of cytokine signaling 1.	Suppressor of cytokine signaling 5.	0.776
N301_01349	N301_08999	A0A0A0AR25	A0A0A0AMH2	Suppressor of cytokine signaling 1.	Tyrosine-protein kinase.	0.478
N301_01349	N301_10941	A0A0A0AR25	A0A0A0AIY2	Suppressor of cytokine signaling 1.	Tyrosine-protein kinase Mer.	0.481
N301_01349	N301_13964	A0A0A0AR25	A0A0A0APR4	Suppressor of cytokine signaling 1.	Suppressor of cytokine signaling 6.	0.703
N301_01349	N301_15368	A0A0A0AR25	A0A0A0AZZ7	Suppressor of cytokine signaling 1.	Tyrosine-protein kinase.	0.685
N301_01718	N301_08999	A0A0A0ADH1	A0A0A0AMH2	Tumor necrosis factor alpha-induced protein 3.	Tyrosine-protein kinase.	0.509
N301_01952	N301_07471	A0A0A0ALS2	A0A0A0A242	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1.	Tyrosine-protein phosphatase non-receptor type 6.	0.812
N301_01952	N301_08999	A0A0A0ALS2	A0A0A0AMH2	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1.	Tyrosine-protein kinase.	0.444
N301_01952	N301_10241	A0A0A0ALS2	A0A0A0ADY8	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1.	SAM domain-containing protein SAMSN-1.	0.458
N301_01952	N301_15368	A0A0A0ALS2	A0A0A0AZZ7	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1.	Tyrosine-protein kinase.	0.767
N301_02504	N301_03163	A0A0A0ATZ9	A0A0A0A7W0	Cytotoxic T-lymphocyte protein 4.	V-set domain-containing T-cell activation inhibitor 1.	0.724
N301_02504	N301_04272	A0A0A0ATZ9	A0A0A0AV66	Cytotoxic T-lymphocyte protein 4.	Programmed cell death 1 ligand 1.	0.666
N301_02504	N301_04274	A0A0A0ATZ9	A0A0A0AT91	Cytotoxic T-lymphocyte protein 4.	Programmed cell death 1 ligand 2.	0.443
N301_02504	N301_07170	A0A0A0ATZ9	A0A0A0ATS1	Cytotoxic T-lymphocyte protein 4.	T-lymphocyte activation antigen CD80.	0.993
N301_02504	N301_07471	A0A0A0ATZ9	A0A0A0A242	Cytotoxic T-lymphocyte protein 4.	Tyrosine-protein phosphatase non-receptor type 6.	0.852
N301_02504	N301_07481	A0A0A0ATZ9	A0A0A0A131	Cytotoxic T-lymphocyte protein 4.	Lymphocyte activation 3.	0.670