60 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_16333	Synaptotagmin-11. (418 aa)
	N301_02209	Legumain. (430 aa)
	N301_13518	Kinase; Belongs to the inositol phosphokinase (IPK) family. (378 aa)
	N301_10139	Ectonucleoside triphosphate diphosphohydrolase 6; Belongs to the GDA1/CD39 NTPase family. (381 aa)
	N301_10862	Non-specific serine/threonine protein kinase. (517 aa)
	N301_14069	Short transient receptor potential channel 1. (736 aa)
	N301_00233	Adenylate cyclase type 1. (1089 aa)
	N301_03082	Calcium-binding mitochondrial carrier protein Aralar1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (666 aa)
	N301_13792	Copine-2. (544 aa)
	N301_01019	Kinase; Belongs to the inositol phosphokinase (IPK) family. (298 aa)
	N301_14802	Copine-4. (556 aa)
	N301_07715	Calcium-binding mitochondrial carrier protein Aralar2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (654 aa)
	N301_00956	Synaptotagmin-13. (429 aa)
	N301_07772	Calcium-activated potassium channel subunit beta-2. (217 aa)
	N301_08517	Synaptotagmin-2. (404 aa)
	N301_13619	Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (236 aa)
	N301_04744	Adenylate cyclase type 8; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (946 aa)
	N301_10218	Voltage-dependent calcium channel gamma-2 subunit; Regulates the trafficking and gating properties of AMPA- selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization. Does not show subunit-specific AMPA receptor regulation and regulates all AMPAR subunits. Thought to stabilize the calcium channel in an inactivated (closed) state; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (323 aa)
	N301_16578	Arachidonate 5-lipoxygenase-activating protein. (143 aa)
	N301_01057	Homer protein 1. (266 aa)
	N301_08578	Thrombospondin-1. (1110 aa)
	N301_14932	Neuroendocrine convertase 1; Belongs to the peptidase S8 family. (680 aa)
	N301_00512	Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family. (303 aa)
	N301_03246	Non-specific serine/threonine protein kinase. (521 aa)
	N301_12311	Ras GTPase-activating protein 4. (480 aa)
	N301_04099	Homer protein 1. (363 aa)
	N301_04115	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family. (322 aa)
	N301_01774	RasGAP-activating-like 1. (365 aa)
	N301_15022	Ryanodine receptor 3. (174 aa)
	N301_14089	Annexin. (502 aa)
	N301_04540	Programmed cell death protein 6. (165 aa)
	N301_15023	Ryanodine receptor 3. (108 aa)
	N301_05390	Copine-1. (528 aa)
	N301_14968	Eukaryotic elongation factor 2 kinase. (725 aa)
	N301_11066	Synaptotagmin-17. (464 aa)
	N301_06012	Peflin. (176 aa)
	N301_15037	Synaptotagmin-10. (472 aa)
	N301_08562	Calpain-3; Belongs to the peptidase C2 family. (798 aa)
	N301_05743	Myocyte-specific enhancer factor 2C. (457 aa)
	N301_00728	Synaptotagmin-7. (360 aa)
	N301_00841	Phosphatidylinositol-glycan-specific phospholipase D. (835 aa)
	N301_00794	Synaptotagmin-6. (441 aa)
	N301_02064	Ryanodine receptor 3. (4326 aa)
	N301_02379	Synaptotagmin-4. (414 aa)
	N301_14118	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (269 aa)
	N301_14226	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (598 aa)
	N301_01603	Nicastrin. (678 aa)
	N301_02475	Calcium-responsive transcription factor. (664 aa)
	N301_07639	CDK-activating kinase assembly factor MAT1. (279 aa)
	N301_08943	Copine-7. (473 aa)
	N301_02012	Stromal interaction molecule 1. (401 aa)
	N301_16018	Alpha-adducin. (736 aa)
	N301_03958	Polycystin-2. (549 aa)
	N301_02670	Copine-3. (532 aa)
	N301_14258	Homer protein 1. (97 aa)
	N301_15801	Synaptotagmin-1. (424 aa)
	N301_10393	Synaptotagmin-15. (350 aa)
	N301_12699	Transient receptor potential cation channel subfamily M member 2. (1499 aa)
	N301_04325	Synaptotagmin-9. (443 aa)
	N301_13187	Fibrinogen gamma chain. (105 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00233	N301_04744	A0A0A0A224	A0A0A0A977	Adenylate cyclase type 1.	Adenylate cyclase type 8; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	0.828
N301_00841	N301_13187	A0A0A0ANF0	A0A0A0B4E5	Phosphatidylinositol-glycan-specific phospholipase D.	Fibrinogen gamma chain.	0.635
N301_01019	N301_13518	A0A0A0A3L3	A0A099ZWP7	Kinase; Belongs to the inositol phosphokinase (IPK) family.	Kinase; Belongs to the inositol phosphokinase (IPK) family.	0.826
N301_01057	N301_14258	A0A0A0ACC6	A0A0A0B173	Homer protein 1.	Homer protein 1.	0.796
N301_01603	N301_08578	A0A0A0ATN4	A0A0A0ADR6	Nicastrin.	Thrombospondin-1.	0.506
N301_02012	N301_14069	A0A0A0AWP7	A0A0A0A1N1	Stromal interaction molecule 1.	Short transient receptor potential channel 1.	0.893
N301_02064	N301_15022	A0A0A0AP67	A0A0A0AII5	Ryanodine receptor 3.	Ryanodine receptor 3.	0.943
N301_02064	N301_15023	A0A0A0AP67	A0A0A0AJS5	Ryanodine receptor 3.	Ryanodine receptor 3.	0.924
N301_02379	N301_04325	A0A0A0AQ75	A0A0A0B204	Synaptotagmin-4.	Synaptotagmin-9.	0.612
N301_02379	N301_08517	A0A0A0AQ75	A0A0A0A8D2	Synaptotagmin-4.	Synaptotagmin-2.	0.771
N301_02379	N301_15801	A0A0A0AQ75	A0A0A0B1G8	Synaptotagmin-4.	Synaptotagmin-1.	0.771
N301_03082	N301_07715	A0A0A0A2G9	A0A0A0A495	Calcium-binding mitochondrial carrier protein Aralar1; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Calcium-binding mitochondrial carrier protein Aralar2; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.558
N301_03246	N301_10862	A0A0A0AG54	A0A0A0A120	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.908
N301_03246	N301_14968	A0A0A0AG54	A0A0A0AKA7	Non-specific serine/threonine protein kinase.	Eukaryotic elongation factor 2 kinase.	0.828
N301_03958	N301_14069	A0A0A0AXQ8	A0A0A0A1N1	Polycystin-2.	Short transient receptor potential channel 1.	0.719
N301_04325	N301_02379	A0A0A0B204	A0A0A0AQ75	Synaptotagmin-9.	Synaptotagmin-4.	0.612
N301_04325	N301_08517	A0A0A0B204	A0A0A0A8D2	Synaptotagmin-9.	Synaptotagmin-2.	0.647
N301_04325	N301_15801	A0A0A0B204	A0A0A0B1G8	Synaptotagmin-9.	Synaptotagmin-1.	0.646
N301_04325	N301_16333	A0A0A0B204	A0A099ZVV3	Synaptotagmin-9.	Synaptotagmin-11.	0.612
N301_04540	N301_08562	A0A0A0AIS7	A0A0A0AMJ3	Programmed cell death protein 6.	Calpain-3; Belongs to the peptidase C2 family.	0.577