19 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_01158	SH3 and multiple ankyrin repeat domains protein 2. (1838 aa)
	N301_03751	Patched domain-containing protein 4. (887 aa)
	N301_10996	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin. (572 aa)
	N301_01033	Regulatory-associated protein of mTOR. (1336 aa)
	N301_08288	Guanine nucleotide-binding protein subunit beta-like 1. (328 aa)
	N301_03191	Fatty acid amide hydrolase. (479 aa)
	N301_01804	Bardet-Biedl syndrome 4 protein. (511 aa)
	N301_16314	Potassium voltage-gated channel subfamily KQT member 1. (82 aa)
	N301_15472	SH3 and multiple ankyrin repeat domains protein 3. (130 aa)
	N301_04758	Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family. (384 aa)
	N301_09867	Signal peptidase complex catalytic subunit SEC11. (163 aa)
	N301_03671	Patched domain-containing protein 1. (771 aa)
	N301_10754	Ataxin-1. (778 aa)
	N301_14926	Signal peptidase complex catalytic subunit SEC11. (146 aa)
	N301_15471	SH3 and multiple ankyrin repeat domains protein 3. (995 aa)
	N301_15243	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (632 aa)
	N301_12983	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (302 aa)
	N301_10803	Glucagon family neuropeptides. (95 aa)
	N301_03991	Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family. (384 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_01033	N301_09867	A0A0A0AMJ4	A0A0A0B0N5	Regulatory-associated protein of mTOR.	Signal peptidase complex catalytic subunit SEC11.	0.500
N301_01033	N301_14926	A0A0A0AMJ4	A0A0A0ABI1	Regulatory-associated protein of mTOR.	Signal peptidase complex catalytic subunit SEC11.	0.500
N301_01158	N301_15471	A0A0A0AK72	A0A0A0A7B3	SH3 and multiple ankyrin repeat domains protein 2.	SH3 and multiple ankyrin repeat domains protein 3.	0.900
N301_01804	N301_08288	A0A0A0A4S0	A0A0A0APA1	Bardet-Biedl syndrome 4 protein.	Guanine nucleotide-binding protein subunit beta-like 1.	0.440
N301_04758	N301_09867	A0A099ZXD2	A0A0A0B0N5	Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.	Signal peptidase complex catalytic subunit SEC11.	0.831
N301_04758	N301_14926	A0A099ZXD2	A0A0A0ABI1	Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.	Signal peptidase complex catalytic subunit SEC11.	0.831
N301_08288	N301_01804	A0A0A0APA1	A0A0A0A4S0	Guanine nucleotide-binding protein subunit beta-like 1.	Bardet-Biedl syndrome 4 protein.	0.440
N301_09867	N301_01033	A0A0A0B0N5	A0A0A0AMJ4	Signal peptidase complex catalytic subunit SEC11.	Regulatory-associated protein of mTOR.	0.500
N301_09867	N301_04758	A0A0A0B0N5	A0A099ZXD2	Signal peptidase complex catalytic subunit SEC11.	Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.	0.831
N301_14926	N301_01033	A0A0A0ABI1	A0A0A0AMJ4	Signal peptidase complex catalytic subunit SEC11.	Regulatory-associated protein of mTOR.	0.500
N301_14926	N301_04758	A0A0A0ABI1	A0A099ZXD2	Signal peptidase complex catalytic subunit SEC11.	Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.	0.831
N301_15471	N301_01158	A0A0A0A7B3	A0A0A0AK72	SH3 and multiple ankyrin repeat domains protein 3.	SH3 and multiple ankyrin repeat domains protein 2.	0.900
N301_15471	N301_15472	A0A0A0A7B3	A0A0A0A464	SH3 and multiple ankyrin repeat domains protein 3.	SH3 and multiple ankyrin repeat domains protein 3.	0.969
N301_15472	N301_15471	A0A0A0A464	A0A0A0A7B3	SH3 and multiple ankyrin repeat domains protein 3.	SH3 and multiple ankyrin repeat domains protein 3.	0.969