7 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_14572	Lon proteolytic domain-containing protein; Belongs to the peptidase S16 family. (113 aa)
	N301_05205	Werner syndrome ATP-dependent helicase. (1364 aa)
	N301_14573	Uncharacterized protein. (699 aa)
	N301_09246	DNA repair protein RAD50. (1312 aa)
	N301_14066	5'-3' exoribonuclease 1. (1687 aa)
	N301_00516	Putative ATP-dependent RNA helicase DHX36. (910 aa)
	N301_03398	ATP-dependent DNA helicase; Belongs to the helicase family. (362 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00516	N301_05205	A0A0A0AF48	A0A0A0AJ77	Putative ATP-dependent RNA helicase DHX36.	Werner syndrome ATP-dependent helicase.	0.435
N301_03398	N301_05205	A0A0A0AGL1	A0A0A0AJ77	ATP-dependent DNA helicase; Belongs to the helicase family.	Werner syndrome ATP-dependent helicase.	0.842
N301_03398	N301_09246	A0A0A0AGL1	A0A099ZZ55	ATP-dependent DNA helicase; Belongs to the helicase family.	DNA repair protein RAD50.	0.849
N301_05205	N301_00516	A0A0A0AJ77	A0A0A0AF48	Werner syndrome ATP-dependent helicase.	Putative ATP-dependent RNA helicase DHX36.	0.435
N301_05205	N301_03398	A0A0A0AJ77	A0A0A0AGL1	Werner syndrome ATP-dependent helicase.	ATP-dependent DNA helicase; Belongs to the helicase family.	0.842
N301_05205	N301_09246	A0A0A0AJ77	A0A099ZZ55	Werner syndrome ATP-dependent helicase.	DNA repair protein RAD50.	0.995
N301_09246	N301_03398	A0A099ZZ55	A0A0A0AGL1	DNA repair protein RAD50.	ATP-dependent DNA helicase; Belongs to the helicase family.	0.849
N301_09246	N301_05205	A0A099ZZ55	A0A0A0AJ77	DNA repair protein RAD50.	Werner syndrome ATP-dependent helicase.	0.995
N301_14572	N301_14573	A0A0A0A9L6	A0A0A0A6E6	Lon proteolytic domain-containing protein; Belongs to the peptidase S16 family.	Uncharacterized protein.	0.951
N301_14573	N301_14572	A0A0A0A6E6	A0A0A0A9L6	Uncharacterized protein.	Lon proteolytic domain-containing protein; Belongs to the peptidase S16 family.	0.951