13 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_08156	PRA1 family protein. (129 aa)
	N301_05374	Metabotropic glutamate receptor 2. (769 aa)
	N301_08701	Histamine H3 receptor; Belongs to the G-protein coupled receptor 1 family. (315 aa)
	N301_15888	Rab3 GTPase-activating protein catalytic subunit. (981 aa)
	N301_11802	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (388 aa)
	N301_11870	Angiotensin-converting enzyme. (809 aa)
	N301_14226	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (598 aa)
	N301_00335	Large neutral amino acids transporter small subunit 1. (441 aa)
	N301_11869	Collectrin. (223 aa)
	N301_02379	Synaptotagmin-4. (414 aa)
	N301_04221	Cannabinoid receptor; Involved in cannabinoid-induced CNS effects. Belongs to the G-protein coupled receptor 1 family. (473 aa)
	N301_13631	Cannabinoid receptor 2; Belongs to the G-protein coupled receptor 1 family. (341 aa)
	N301_10572	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems. (260 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_04221	N301_08701	A0A0A0AP70	A0A0A0A2L7	Cannabinoid receptor; Involved in cannabinoid-induced CNS effects. Belongs to the G-protein coupled receptor 1 family.	Histamine H3 receptor; Belongs to the G-protein coupled receptor 1 family.	0.404
N301_08701	N301_04221	A0A0A0A2L7	A0A0A0AP70	Histamine H3 receptor; Belongs to the G-protein coupled receptor 1 family.	Cannabinoid receptor; Involved in cannabinoid-induced CNS effects. Belongs to the G-protein coupled receptor 1 family.	0.404
N301_08701	N301_13631	A0A0A0A2L7	A0A0A0ADD0	Histamine H3 receptor; Belongs to the G-protein coupled receptor 1 family.	Cannabinoid receptor 2; Belongs to the G-protein coupled receptor 1 family.	0.404
N301_13631	N301_08701	A0A0A0ADD0	A0A0A0A2L7	Cannabinoid receptor 2; Belongs to the G-protein coupled receptor 1 family.	Histamine H3 receptor; Belongs to the G-protein coupled receptor 1 family.	0.404