STRINGSTRING
N301_15589 N301_15589 N301_00713 N301_00713 N301_13381 N301_13381 N301_08648 N301_08648 N301_06440 N301_06440 N301_01407 N301_01407 N301_00300 N301_00300 N301_10885 N301_10885 N301_10914 N301_10914 N301_10883 N301_10883 N301_00891 N301_00891 N301_11960 N301_11960 N301_10886 N301_10886 N301_15627 N301_15627 N301_07705 N301_07705 N301_16314 N301_16314 N301_09301 N301_09301 N301_10884 N301_10884 N301_10367 N301_10367 N301_09498 N301_09498 N301_00418 N301_00418 N301_01917 N301_01917 N301_02175 N301_02175 N301_12544 N301_12544 N301_01042 N301_01042 SRP54 SRP54 N301_09958 N301_09958 CXCL8-5 CXCL8-5 N301_05436 N301_05436 N301_15844 N301_15844 N301_09875 N301_09875 N301_03991 N301_03991 N301_01649 N301_01649 N301_04357 N301_04357 N301_16789 N301_16789 N301_11650 N301_11650 N301_16616 N301_16616 N301_11282 N301_11282 N301_15678 N301_15678 N301_11492 N301_11492 N301_15675 N301_15675 N301_08414 N301_08414 N301_15677 N301_15677 N301_13018 N301_13018 N301_13033 N301_13033 N301_08010 N301_08010 N301_01705 N301_01705 N301_00417 N301_00417 N301_13593 N301_13593 N301_13447 N301_13447 N301_10326 N301_10326 N301_01622 N301_01622 N301_05167 N301_05167 N301_01850 N301_01850
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_15589UPF0762 protein C6orf58. (346 aa)
N301_00713Dynein assembly factor 1, axonemal. (252 aa)
N301_13381Polycystin-1. (4190 aa)
N301_08648Protein kinase domain-containing protein, cytoplasmic. (280 aa)
N301_06440Transforming growth factor beta; Belongs to the TGF-beta family. (412 aa)
N301_01407Myocardin. (951 aa)
N301_00300Indian hedgehog protein. (308 aa)
N301_10885Nipped-B-like. (137 aa)
N301_10914Interleukin-6 receptor subunit beta. (895 aa)
N301_10883Nipped-B protein. (817 aa)
N301_00891G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (354 aa)
N301_11960Catenin beta-1. (777 aa)
N301_10886Nipped-B-like. (206 aa)
N301_15627Transcription factor 21. (150 aa)
N301_07705Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. (366 aa)
N301_16314Potassium voltage-gated channel subfamily KQT member 1. (82 aa)
N301_09301WD repeat-containing and planar cell polarity effector protein fritz. (472 aa)
N301_10884Nipped-B-like. (82 aa)
N301_10367Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (320 aa)
N301_09498Homeobox protein Nkx-2.6. (136 aa)
N301_00418Protein cordon-bleu. (423 aa)
N301_01917Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (938 aa)
N301_02175Transforming growth factor beta-3. (295 aa)
N301_12544Pituitary homeobox 2. (226 aa)
N301_01042Coiled-coil domain-containing protein 40. (919 aa)
SRP54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
N301_09958Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (259 aa)
CXCL8-5Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (95 aa)
N301_05436Protein kinase domain-containing protein, cytoplasmic. (246 aa)
N301_15844CXADR-like membrane protein. (366 aa)
N301_09875RNA-binding protein with multiple splicing. (150 aa)
N301_03991Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family. (384 aa)
N301_01649PR domain zinc finger protein 1. (810 aa)
N301_04357Leucine-rich repeat-containing G-protein coupled receptor 4. (730 aa)
N301_16789Crk-like. (299 aa)
N301_11650Bone morphogenetic protein 4. (350 aa)
N301_16616Stimulated by retinoic acid 6. (621 aa)
N301_11282Protein YIPF. (217 aa)
N301_15678Nipped-B-like. (207 aa)
N301_11492Retinoblastoma-associated protein. (870 aa)
N301_15675Nipped-B protein. (751 aa)
N301_08414Huntingtin-interacting protein 1-related protein. (891 aa)
N301_15677Nipped-B-like. (148 aa)
N301_13018G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (433 aa)
N301_13033Krueppel-like factor 5. (383 aa)
N301_08010G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (479 aa)
N301_01705Jouberin. (1164 aa)
N301_00417Protein cordon-bleu. (844 aa)
N301_13593PR domain zinc finger protein 1. (41 aa)
N301_13447Krueppel-like factor 5. (374 aa)
N301_10326Protein wntless. (541 aa)
N301_01622Coiled-coil domain-containing protein 103. (203 aa)
N301_05167Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes. (663 aa)
N301_01850WD repeat-containing protein 19. (1341 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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