STRINGSTRING
N301_12233 N301_12233 PAFAH1B1 PAFAH1B1 N301_07525 N301_07525 N301_12558 N301_12558 N301_03991 N301_03991 N301_16139 N301_16139 N301_13144 N301_13144 N301_14665 N301_14665 N301_14664 N301_14664 N301_11110 N301_11110 N301_09301 N301_09301 N301_08711 N301_08711 N301_16314 N301_16314
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_12233Glutaredoxin domain-containing cysteine-rich protein 2. (246 aa)
PAFAH1B1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
N301_07525Anion exchange protein. (987 aa)
N301_12558Protein transport protein Sec24B. (1167 aa)
N301_03991Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family. (384 aa)
N301_16139SLIT and NTRK-like 6. (841 aa)
N301_13144RE1-silencing transcription factor. (892 aa)
N301_14665PDZ domain-containing protein. (54 aa)
N301_14664PDZ domain-containing protein 7. (363 aa)
N301_11110Protein scribble. (459 aa)
N301_09301WD repeat-containing and planar cell polarity effector protein fritz. (472 aa)
N301_08711Leucine-rich repeat-containing protein 1. (472 aa)
N301_16314Potassium voltage-gated channel subfamily KQT member 1. (82 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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