STRINGSTRING
N301_04525 N301_04525 N301_07471 N301_07471 N301_03526 N301_03526 N301_11524 N301_11524 N301_00510 N301_00510 N301_04573 N301_04573 N301_15839 N301_15839 N301_04661 N301_04661 N301_13184 N301_13184 N301_13187 N301_13187
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_04525Biogenesis of lysosome-related organelles complex 1 subunit 4. (136 aa)
N301_07471Tyrosine-protein phosphatase non-receptor type 6. (608 aa)
N301_03526Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (573 aa)
N301_11524Integrin beta. (739 aa)
N301_00510p2Y purinoceptor 12. (279 aa)
N301_04573Cystine/glutamate transporter. (467 aa)
N301_15839Ubiquitin-associated and SH3 domain-containing protein B. (596 aa)
N301_04661Cystine/glutamate transporter. (483 aa)
N301_13184Fibrinogen C-terminal domain-containing protein. (479 aa)
N301_13187Fibrinogen gamma chain. (105 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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