STRINGSTRING
N301_15744 N301_15744 N301_11619 N301_11619 N301_01662 N301_01662 N301_13037 N301_13037 N301_02909 N301_02909 N301_03682 N301_03682 N301_02330 N301_02330 N301_05300 N301_05300 N301_07616 N301_07616 N301_11471 N301_11471 N301_11900 N301_11900 N301_06014 N301_06014 N301_10009 N301_10009 N301_01046 N301_01046 N301_15217 N301_15217 N301_14409 N301_14409 N301_10607 N301_10607 N301_11345 N301_11345 N301_00802 N301_00802 N301_02009 N301_02009 N301_09007 N301_09007 N301_13109 N301_13109 N301_09922 N301_09922 N301_05205 N301_05205 N301_12366 N301_12366 N301_12329 N301_12329 N301_12552 N301_12552 N301_12931 N301_12931 N301_12372 N301_12372 N301_10436 N301_10436 N301_13637 N301_13637 N301_04122 N301_04122 N301_15431 N301_15431 N301_15408 N301_15408 N301_00833 N301_00833 N301_08847 N301_08847 N301_12891 N301_12891 N301_05099 N301_05099 N301_16521 N301_16521 N301_09906 N301_09906 N301_16066 N301_16066 N301_08626 N301_08626 N301_06403 N301_06403 N301_09246 N301_09246 N301_08081 N301_08081 N301_14659 N301_14659 N301_14804 N301_14804 N301_13723 N301_13723 N301_02361 N301_02361 N301_05648 N301_05648 N301_09327 N301_09327 N301_15613 N301_15613 N301_12630 N301_12630 N301_15743 N301_15743
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_15744Reverse transcriptase domain-containing protein. (256 aa)
N301_11619DNA polymerase epsilon subunit 2. (503 aa)
N301_01662Uncharacterized protein. (273 aa)
N301_13037DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2044 aa)
N301_02909Protein-lysine 6-oxidase. (206 aa)
N301_03682DNA polymerase. (1461 aa)
N301_02330Adrenocortical dysplasia protein. (343 aa)
N301_05300DNA ligase. (912 aa)
N301_07616Zinc finger and BTB domain-containing protein 1. (711 aa)
N301_11471Coiled-coil domain-containing protein 111. (546 aa)
N301_11900Prohibitin. (239 aa)
N301_06014Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1251 aa)
N301_10009DNA polymerase delta subunit 3. (442 aa)
N301_01046Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (802 aa)
N301_15217SprT-like domain-containing protein Spartan. (359 aa)
N301_14409H/ACA ribonucleoprotein complex subunit 4. (466 aa)
N301_10607DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (505 aa)
N301_11345Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)
N301_00802Synaptonemal complex protein 1. (939 aa)
N301_02009Uncharacterized protein. (275 aa)
N301_09007PIN2/TERF1-interacting telomerase inhibitor 1. (188 aa)
N301_13109Telomere length regulation protein TEL2. (686 aa)
N301_09922Uncharacterized protein. (271 aa)
N301_05205Werner syndrome ATP-dependent helicase. (1364 aa)
N301_12366Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (602 aa)
N301_12329DNA ligase. (949 aa)
N301_12552H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (178 aa)
N301_12931ATPase WRNIP1. (393 aa)
N301_12372Polymerase delta-interacting protein 2. (323 aa)
N301_10436Protection of telomeres protein 1. (786 aa)
N301_13637Uncharacterized protein. (275 aa)
N301_04122DNA polymerase kappa. (865 aa)
N301_15431CS domain-containing protein. (146 aa)
N301_15408Spermatogenesis-associated protein 22. (365 aa)
N301_00833DNA polymerase delta subunit 2. (443 aa)
N301_08847DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (272 aa)
N301_12891Uncharacterized protein. (279 aa)
N301_05099DNA polymerase nu. (640 aa)
N301_16521DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1255 aa)
N301_09906Sphingomyelin phosphodiesterase 3. (662 aa)
N301_16066Reverse transcriptase domain-containing protein. (258 aa)
N301_08626Denticleless protein. (713 aa)
N301_06403Protein lin-9. (532 aa)
N301_09246DNA repair protein RAD50. (1312 aa)
N301_08081HGTP_anticodon domain-containing protein. (329 aa)
N301_14659DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (491 aa)
N301_14804Reverse transcriptase domain-containing protein. (304 aa)
N301_13723DNA polymerase eta. (564 aa)
N301_02361Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (189 aa)
N301_05648DNA polymerase subunit gamma-1. (1187 aa)
N301_09327Thymidine kinase. (206 aa)
N301_15613Connective tissue growth factor. (253 aa)
N301_12630dNK domain-containing protein. (113 aa)
N301_15743Uncharacterized protein. (254 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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