STRINGSTRING
N301_10233 N301_10233 N301_06349 N301_06349 N301_06440 N301_06440 N301_14033 N301_14033 N301_07106 N301_07106 N301_16643 N301_16643 N301_08083 N301_08083 N301_05693 N301_05693 N301_00891 N301_00891 N301_14052 N301_14052 N301_06747 N301_06747 N301_12848 N301_12848 N301_13787 N301_13787 N301_03737 N301_03737 N301_16164 N301_16164 N301_16189 N301_16189 PAFAH1B1 PAFAH1B1 N301_10161 N301_10161 N301_13018 N301_13018 N301_12074 N301_12074 N301_03429 N301_03429 N301_08160 N301_08160 N301_12349 N301_12349 N301_01917 N301_01917 N301_11846 N301_11846 N301_00696 N301_00696 SRP54 SRP54 N301_01228 N301_01228 CXCL8-4 CXCL8-4 N301_14182 N301_14182 N301_13883 N301_13883 N301_10701 N301_10701 N301_13885 N301_13885 N301_07848 N301_07848 N301_09203 N301_09203 N301_15855 N301_15855 N301_08339 N301_08339 N301_01314 N301_01314 N301_13959 N301_13959 N301_13957 N301_13957 N301_10283 N301_10283 N301_11660 N301_11660
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_10233Coxsackievirus and adenovirus receptor. (350 aa)
N301_06349Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (657 aa)
N301_06440Transforming growth factor beta; Belongs to the TGF-beta family. (412 aa)
N301_14033Secretogranin-2. (627 aa)
N301_07106Protein jagunal 1. (147 aa)
N301_16643Integrin alpha-9; Belongs to the integrin alpha chain family. (827 aa)
N301_08083Platelet endothelial cell adhesion molecule. (695 aa)
N301_05693Junctional adhesion molecule-like. (221 aa)
N301_00891G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (354 aa)
N301_14052C-C motif chemokine. (86 aa)
N301_06747Tyrosine-protein kinase transmembrane receptor ROR2. (96 aa)
N301_12848Granulocyte colony-stimulating factor receptor. (588 aa)
N301_13787Uncharacterized protein. (88 aa)
N301_03737Glucose-6-phosphate translocase. (429 aa)
N301_16164Interleukin-17 receptor A. (783 aa)
N301_16189Receptor-type tyrosine-protein phosphatase O. (1193 aa)
PAFAH1B1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
N301_10161Platelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (222 aa)
N301_13018G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (433 aa)
N301_12074Interleukin-1 receptor-associated kinase 4. (452 aa)
N301_03429Mucolipin-2. (535 aa)
N301_08160Protein FAM19A4. (87 aa)
N301_12349Rab5 GDP/GTP exchange factor. (491 aa)
N301_01917Mast/stem cell growth factor receptor Kit; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (938 aa)
N301_11846Annexin. (342 aa)
N301_00696Epithelial membrane protein 2. (167 aa)
SRP54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
N301_01228Rho guanine nucleotide exchange factor 5. (520 aa)
CXCL8-4Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (94 aa)
N301_141821-phosphatidylinositol 3-phosphate 5-kinase. (1500 aa)
N301_13883C-C motif chemokine. (65 aa)
N301_10701Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (1789 aa)
N301_13885C-C motif chemokine. (91 aa)
N301_07848Interleukin-17F. (160 aa)
N301_09203C-C motif chemokine 19. (65 aa)
N301_15855Junctional adhesion molecule C. (293 aa)
N301_08339Lymphotactin. (72 aa)
N301_01314Prostate-associated microseminoprotein. (110 aa)
N301_13959Tyrosine-protein kinase transmembrane receptor ROR2. (778 aa)
N301_13957Tyrosine-protein kinase. (626 aa)
N301_10283Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family. (265 aa)
N301_11660Galectin. (271 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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