7 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_10960	Prolyl-tRNA synthetase associated domain-containing protein 1. (142 aa)
	AARS	Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (963 aa)
	N301_02099	Putative D-tyrosyl-tRNA(Tyr) deacylase 2. (131 aa)
	N301_12231	Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (1175 aa)
	N301_11950	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (904 aa)
	N301_10115	D-aminoacyl-tRNA deacylase. (193 aa)
	N301_06435	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (926 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AARS	N301_06435	A0A0A0B1A1	A0A099ZYR6	Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.853
AARS	N301_11950	A0A0A0B1A1	A0A0A0A1L5	Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.798
AARS	N301_12231	A0A0A0B1A1	A0A0A0AAE2	Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.	Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.816
N301_06435	AARS	A0A099ZYR6	A0A0A0B1A1	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.	0.853
N301_06435	N301_11950	A0A099ZYR6	A0A0A0A1L5	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.974
N301_06435	N301_12231	A0A099ZYR6	A0A0A0AAE2	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.974
N301_11950	AARS	A0A0A0A1L5	A0A0A0B1A1	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.	0.798
N301_11950	N301_06435	A0A0A0A1L5	A0A099ZYR6	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.974
N301_11950	N301_12231	A0A0A0A1L5	A0A0A0AAE2	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.885
N301_12231	AARS	A0A0A0AAE2	A0A0A0B1A1	Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.	Alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.	0.816
N301_12231	N301_06435	A0A0A0AAE2	A0A099ZYR6	Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.974
N301_12231	N301_11950	A0A0A0AAE2	A0A0A0A1L5	Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.885