32 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_10055	Homeobox-containing protein 1. (391 aa)
	N301_08681	Telomeric repeat-binding factor 2-interacting protein 1. (173 aa)
	N301_13559	DNA replication ATP-dependent helicase/nuclease DNA2. (1004 aa)
	N301_13417	Non-structural maintenance of chromosomes element 1. (235 aa)
	N301_06320	CST complex subunit TEN1. (119 aa)
	N301_03164	CST complex subunit CTC1. (116 aa)
	N301_13740	E3 ubiquitin-protein ligase RNF8. (225 aa)
	N301_10436	Protection of telomeres protein 1. (786 aa)
	N301_10582	Telomere-associated protein RIF1. (2280 aa)
	N301_09944	WD repeat, SAM and U-box domain-containing protein 1. (476 aa)
	N301_05205	Werner syndrome ATP-dependent helicase. (1364 aa)
	N301_04778	NAD-dependent protein deacetylase sirtuin-6. (336 aa)
	N301_12309	Leucine-rich repeat and WD repeat-containing protein 1. (680 aa)
	N301_09007	PIN2/TERF1-interacting telomerase inhibitor 1. (188 aa)
	N301_00792	5' exonuclease Apollo. (303 aa)
	N301_06062	Serine/threonine-protein kinase SRPK; Belongs to the protein kinase superfamily. (322 aa)
	N301_06014	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1251 aa)
	N301_07099	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (264 aa)
	N301_13741	E3 ubiquitin-protein ligase RNF8. (136 aa)
	N301_12634	Coiled-coil domain-containing protein 79. (42 aa)
	N301_12635	Coiled-coil domain-containing protein 79. (383 aa)
	N301_07013	CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (375 aa)
	N301_15288	Zinc finger and BTB domain-containing protein 48. (378 aa)
	N301_00516	Putative ATP-dependent RNA helicase DHX36. (910 aa)
	N301_04153	Doublesex-and mab-3-related transcription factor 2. (355 aa)
	N301_13152	Poly [ADP-ribose] polymerase. (1148 aa)
	N301_11006	Lysine-specific histone demethylase 1A. (736 aa)
	N301_01789	Uncharacterized protein C15orf43. (58 aa)
	N301_02330	Adrenocortical dysplasia protein. (343 aa)
	N301_02657	Nibrin. (750 aa)
	N301_03929	Zinc finger protein 827. (1057 aa)
	N301_02734	Telomeric repeat-binding factor 1. (290 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00516	N301_05205	A0A0A0AF48	A0A0A0AJ77	Putative ATP-dependent RNA helicase DHX36.	Werner syndrome ATP-dependent helicase.	0.435
N301_00792	N301_03929	A0A0A0AQF5	A0A0A0AWH1	5' exonuclease Apollo.	Zinc finger protein 827.	0.511
N301_00792	N301_08681	A0A0A0AQF5	A0A0A0A2J6	5' exonuclease Apollo.	Telomeric repeat-binding factor 2-interacting protein 1.	0.699
N301_00792	N301_10436	A0A0A0AQF5	A0A0A0AGL5	5' exonuclease Apollo.	Protection of telomeres protein 1.	0.546
N301_00792	N301_13740	A0A0A0AQF5	A0A0A0A6J4	5' exonuclease Apollo.	E3 ubiquitin-protein ligase RNF8.	0.515
N301_00792	N301_13741	A0A0A0AQF5	A0A0A0A7U6	5' exonuclease Apollo.	E3 ubiquitin-protein ligase RNF8.	0.515
N301_00792	N301_15288	A0A0A0AQF5	A0A0A0ADG3	5' exonuclease Apollo.	Zinc finger and BTB domain-containing protein 48.	0.510
N301_01789	N301_12634	A0A0A0A4P6	A0A0A0A8G6	Uncharacterized protein C15orf43.	Coiled-coil domain-containing protein 79.	0.829
N301_01789	N301_12635	A0A0A0A4P6	A0A0A0A8R3	Uncharacterized protein C15orf43.	Coiled-coil domain-containing protein 79.	0.922
N301_02330	N301_03164	A0A0A0AZ25	A0A0A0A4S2	Adrenocortical dysplasia protein.	CST complex subunit CTC1.	0.664
N301_02330	N301_05205	A0A0A0AZ25	A0A0A0AJ77	Adrenocortical dysplasia protein.	Werner syndrome ATP-dependent helicase.	0.984
N301_02330	N301_06014	A0A0A0AZ25	A0A0A0AVZ0	Adrenocortical dysplasia protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.948
N301_02330	N301_06320	A0A0A0AZ25	A0A099ZUW9	Adrenocortical dysplasia protein.	CST complex subunit TEN1.	0.736
N301_02330	N301_07013	A0A0A0AZ25	A0A0A0A8Y6	Adrenocortical dysplasia protein.	CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.	0.852
N301_02330	N301_08681	A0A0A0AZ25	A0A0A0A2J6	Adrenocortical dysplasia protein.	Telomeric repeat-binding factor 2-interacting protein 1.	0.956
N301_02330	N301_10436	A0A0A0AZ25	A0A0A0AGL5	Adrenocortical dysplasia protein.	Protection of telomeres protein 1.	0.988
N301_02734	N301_06014	A0A0A0AW97	A0A0A0AVZ0	Telomeric repeat-binding factor 1.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.466
N301_02734	N301_08681	A0A0A0AW97	A0A0A0A2J6	Telomeric repeat-binding factor 1.	Telomeric repeat-binding factor 2-interacting protein 1.	0.615
N301_02734	N301_10436	A0A0A0AW97	A0A0A0AGL5	Telomeric repeat-binding factor 1.	Protection of telomeres protein 1.	0.487
N301_03164	N301_02330	A0A0A0A4S2	A0A0A0AZ25	CST complex subunit CTC1.	Adrenocortical dysplasia protein.	0.664