21 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_02507	Abl interactor 2. (448 aa)
	N301_06817	t-SNARE domain-containing protein 1. (185 aa)
	N301_08308	Synaptosomal-associated protein 29. (206 aa)
	N301_08564	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (209 aa)
	N301_08262	Syntaxin-2; Belongs to the syntaxin family. (280 aa)
	N301_10995	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (146 aa)
	N301_06268	Syntaxin-16. (275 aa)
	N301_04532	Syntaxin-17. (301 aa)
	N301_08596	Vesicle transport through interaction with t-SNAREs 1B. (197 aa)
	N301_15906	Syntaxin-3. (265 aa)
	N301_12247	Syntaxin-8. (211 aa)
	N301_01388	Synaptosomal-associated protein 47. (420 aa)
	N301_15615	Syntaxin-7; Belongs to the syntaxin family. (257 aa)
	N301_07727	BET1. (110 aa)
	N301_02315	Syntaxin-11. (287 aa)
	N301_07388	Syntaxin-1B. (194 aa)
	N301_11021	Syntaxin-12; Belongs to the syntaxin family. (234 aa)
	N301_09697	Syntaxin-6; Belongs to the syntaxin family. (239 aa)
	N301_03636	Keratin, type I cytoskeletal 17; Belongs to the intermediate filament family. (408 aa)
	N301_13902	Syntaxin-1A; Belongs to the syntaxin family. (284 aa)
	N301_11596	Syntaxin-19; Belongs to the syntaxin family. (291 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_01388	N301_02315	A0A0A0A7Z7	A0A0A0A2W4	Synaptosomal-associated protein 47.	Syntaxin-11.	0.775
N301_01388	N301_04532	A0A0A0A7Z7	A0A0A0AHT6	Synaptosomal-associated protein 47.	Syntaxin-17.	0.766
N301_01388	N301_06268	A0A0A0A7Z7	A0A0A0B1Q9	Synaptosomal-associated protein 47.	Syntaxin-16.	0.640
N301_01388	N301_06817	A0A0A0A7Z7	A0A0A0AS04	Synaptosomal-associated protein 47.	t-SNARE domain-containing protein 1.	0.749
N301_01388	N301_07388	A0A0A0A7Z7	A0A099ZWW7	Synaptosomal-associated protein 47.	Syntaxin-1B.	0.777
N301_01388	N301_08262	A0A0A0A7Z7	A0A0A0AMS0	Synaptosomal-associated protein 47.	Syntaxin-2; Belongs to the syntaxin family.	0.780
N301_01388	N301_08308	A0A0A0A7Z7	A0A0A0ARY7	Synaptosomal-associated protein 47.	Synaptosomal-associated protein 29.	0.461
N301_01388	N301_08564	A0A0A0A7Z7	A0A0A0ANY5	Synaptosomal-associated protein 47.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.432
N301_01388	N301_08596	A0A0A0A7Z7	A0A0A0AF16	Synaptosomal-associated protein 47.	Vesicle transport through interaction with t-SNAREs 1B.	0.466
N301_01388	N301_09697	A0A0A0A7Z7	A0A0A0AYF5	Synaptosomal-associated protein 47.	Syntaxin-6; Belongs to the syntaxin family.	0.639
N301_01388	N301_11021	A0A0A0A7Z7	A0A0A0B1J6	Synaptosomal-associated protein 47.	Syntaxin-12; Belongs to the syntaxin family.	0.785
N301_01388	N301_11596	A0A0A0A7Z7	A0A0A0ASR4	Synaptosomal-associated protein 47.	Syntaxin-19; Belongs to the syntaxin family.	0.772
N301_01388	N301_12247	A0A0A0A7Z7	A0A0A0A862	Synaptosomal-associated protein 47.	Syntaxin-8.	0.639
N301_01388	N301_13902	A0A0A0A7Z7	A0A0A0ATI4	Synaptosomal-associated protein 47.	Syntaxin-1A; Belongs to the syntaxin family.	0.786
N301_01388	N301_15615	A0A0A0A7Z7	A0A0A0A5T9	Synaptosomal-associated protein 47.	Syntaxin-7; Belongs to the syntaxin family.	0.785
N301_01388	N301_15906	A0A0A0A7Z7	A0A0A0AA59	Synaptosomal-associated protein 47.	Syntaxin-3.	0.786
N301_02315	N301_01388	A0A0A0A2W4	A0A0A0A7Z7	Syntaxin-11.	Synaptosomal-associated protein 47.	0.775
N301_02315	N301_04532	A0A0A0A2W4	A0A0A0AHT6	Syntaxin-11.	Syntaxin-17.	0.635
N301_02315	N301_06268	A0A0A0A2W4	A0A0A0B1Q9	Syntaxin-11.	Syntaxin-16.	0.656
N301_02315	N301_06817	A0A0A0A2W4	A0A0A0AS04	Syntaxin-11.	t-SNARE domain-containing protein 1.	0.599