STRINGSTRING
N301_08439 N301_08439 N301_07270 N301_07270 N301_01816 N301_01816 N301_07269 N301_07269 N301_03526 N301_03526 N301_01690 N301_01690 N301_01912 N301_01912 N301_02093 N301_02093
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_08439Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. (546 aa)
N301_07270Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (473 aa)
N301_01816Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. (529 aa)
N301_07269Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (97 aa)
N301_03526Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (573 aa)
N301_01690Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (444 aa)
N301_01912Sec1 family domain-containing protein 2; Belongs to the STXBP/unc-18/SEC1 family. (143 aa)
N301_02093Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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