STRINGSTRING
N301_06549 N301_06549 N301_07061 N301_07061 N301_07013 N301_07013 N301_08736 N301_08736 N301_04692 N301_04692 N301_02361 N301_02361 N301_13824 N301_13824 N301_03164 N301_03164 N301_06759 N301_06759 N301_11491 N301_11491 N301_08681 N301_08681 N301_07749 N301_07749 N301_00648 N301_00648 N301_15457 N301_15457 N301_13356 N301_13356 N301_06320 N301_06320 N301_06196 N301_06196 N301_03682 N301_03682 N301_02330 N301_02330 N301_02734 N301_02734 N301_06014 N301_06014 N301_02826 N301_02826 N301_10009 N301_10009 N301_08961 N301_08961 N301_14409 N301_14409 N301_02429 N301_02429 N301_02994 N301_02994 N301_06725 N301_06725 N301_15487 N301_15487 N301_01772 N301_01772 N301_12279 N301_12279 N301_12552 N301_12552 N301_01851 N301_01851 N301_10436 N301_10436 N301_03398 N301_03398 N301_08143 N301_08143 N301_00833 N301_00833 N301_05799 N301_05799 N301_15433 N301_15433 N301_08609 N301_08609
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_06549RCC1 and BTB domain-containing protein 1. (531 aa)
N301_07061Putative tRNA pseudouridine synthase 1. (188 aa)
N301_07013CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (375 aa)
N301_08736DNA primase large subunit. (338 aa)
N301_04692Sister chromatid cohesion protein DCC1. (333 aa)
N301_02361Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (189 aa)
N301_13824Uncharacterized protein. (1287 aa)
N301_03164CST complex subunit CTC1. (116 aa)
N301_06759RNA-directed DNA polymerase from mobile element jockey. (110 aa)
N301_11491RCC1 and BTB domain-containing protein 2. (531 aa)
N301_08681Telomeric repeat-binding factor 2-interacting protein 1. (173 aa)
N301_07749Replication factor C subunit 4. (362 aa)
N301_00648H/ACA ribonucleoprotein complex subunit 2. (100 aa)
N301_15457Ankyrin repeat domain-containing protein 66. (182 aa)
N301_13356Chromosome transmission fidelity protein 18. (254 aa)
N301_06320CST complex subunit TEN1. (119 aa)
N301_06196Regulator of telomere elongation helicase 1. (1143 aa)
N301_03682DNA polymerase. (1461 aa)
N301_02330Adrenocortical dysplasia protein. (343 aa)
N301_02734Telomeric repeat-binding factor 1. (290 aa)
N301_06014Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1251 aa)
N301_02826DNA polymerase alpha subunit B. (479 aa)
N301_10009DNA polymerase delta subunit 3. (442 aa)
N301_08961Chromosome transmission fidelity protein 8. (108 aa)
N301_14409H/ACA ribonucleoprotein complex subunit 4. (466 aa)
N301_02429Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B. (1038 aa)
N301_02994Replication factor C subunit 3. (327 aa)
N301_06725Chromosome transmission fidelity protein 18. (162 aa)
N301_15487Cyclin-A2; Belongs to the cyclin family. (304 aa)
N301_01772Replication factor C subunit 5. (284 aa)
N301_12279Replication factor C subunit 2. (316 aa)
N301_12552H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (178 aa)
N301_01851Replication factor C subunit 1. (1150 aa)
N301_10436Protection of telomeres protein 1. (786 aa)
N301_03398ATP-dependent DNA helicase; Belongs to the helicase family. (362 aa)
N301_08143Protein SHQ1. (569 aa)
N301_00833DNA polymerase delta subunit 2. (443 aa)
N301_05799Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C. (1013 aa)
N301_15433DNA primase small subunit. (250 aa)
N301_08609Exonuclease 3'-5' domain-containing protein 2. (621 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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