STRINGSTRING
N301_16672 N301_16672 N301_01215 N301_01215 N301_00057 N301_00057 N301_01328 N301_01328 N301_07077 N301_07077 N301_05220 N301_05220 N301_07729 N301_07729 N301_08056 N301_08056 N301_04373 N301_04373 N301_10497 N301_10497 N301_00261 N301_00261 N301_13317 N301_13317 N301_05038 N301_05038 N301_10840 N301_10840 N301_00882 N301_00882 N301_00660 N301_00660 N301_03417 N301_03417
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_16672cAMP-dependent protein kinase type II-beta regulatory subunit. (316 aa)
N301_01215Ras-related protein Rab-11A. (216 aa)
N301_00057Guanine nucleotide-binding protein subunit beta-4. (87 aa)
N301_01328cAMP-dependent protein kinase type II-alpha regulatory subunit. (316 aa)
N301_07077Rab11 family-interacting protein 2. (510 aa)
N301_05220THAP domain-containing protein 7. (160 aa)
N301_07729Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (45 aa)
N301_08056cAMP-dependent protein kinase type I-alpha regulatory subunit. (390 aa)
N301_04373Ras-related protein Rab-11A. (209 aa)
N301_10497cAMP-dependent protein kinase type I-beta regulatory subunit. (380 aa)
N301_00261Aquaporin-1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
N301_13317Aquaporin-3; Belongs to the MIP/aquaporin (TC 1.A.8) family. (292 aa)
N301_05038Vasotocin-neurophysin VT; Belongs to the vasopressin/oxytocin family. (81 aa)
N301_10840Aquaporin-4; Belongs to the MIP/aquaporin (TC 1.A.8) family. (313 aa)
N301_00882Unconventional myosin-Vb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (758 aa)
N301_00660Rab11 family-interacting protein 1. (514 aa)
N301_03417cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily. (398 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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