25 items (Charadrius vociferus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N301_08035	Tyrosine-protein kinase. (420 aa)
	N301_13818	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (315 aa)
	N301_09260	Voltage-dependent anion-selective channel protein 1. (285 aa)
	N301_07768	Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (739 aa)
	N301_08389	Polyubiquitin-C. (228 aa)
	N301_11302	FUN14 domain-containing protein 2. (147 aa)
	N301_06555	Fibronectin type-III domain-containing protein 3a. (1199 aa)
	N301_07873	Gamma-secretase-activating protein. (826 aa)
	N301_00580	Fibronectin type III domain-containing protein 3B. (1209 aa)
	N301_15403	Serine/threonine-protein kinase ULK2. (1039 aa)
	N301_15418	Polyubiquitin-B. (229 aa)
	N301_02192	Sterile alpha motif domain-containing protein 15. (90 aa)
	N301_00431	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (391 aa)
	N301_02113	CheR domain-containing protein. (269 aa)
	N301_08279	Uncharacterized protein. (226 aa)
	N301_00331	Microtubule-associated proteins 1A/1B light chain 3B. (111 aa)
	N301_11334	Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (755 aa)
	N301_15775	Protein kinase domain-containing protein. (451 aa)
	N301_02620	Uncharacterized protein. (346 aa)
	N301_12169	Sequestosome-1. (394 aa)
	N301_10046	Microtubule-associated proteins 1A/1B light chain 3A. (108 aa)
	N301_04928	FUN14 domain-containing protein 1. (146 aa)
	N301_00062	Protein kinase domain-containing protein. (96 aa)
	N301_06177	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (391 aa)
	N301_01650	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N301_00062	N301_04928	A0A0A0B148	A0A0A0B116	Protein kinase domain-containing protein.	FUN14 domain-containing protein 1.	0.801
N301_00062	N301_07873	A0A0A0B148	A0A0A0ADK7	Protein kinase domain-containing protein.	Gamma-secretase-activating protein.	0.454
N301_00062	N301_08389	A0A0A0B148	A0A0A0A481	Protein kinase domain-containing protein.	Polyubiquitin-C.	0.576
N301_00062	N301_11302	A0A0A0B148	A0A0A0A8D0	Protein kinase domain-containing protein.	FUN14 domain-containing protein 2.	0.582
N301_00062	N301_12169	A0A0A0B148	A0A0A0AZD3	Protein kinase domain-containing protein.	Sequestosome-1.	0.480
N301_00062	N301_15418	A0A0A0B148	A0A0A0AEJ7	Protein kinase domain-containing protein.	Polyubiquitin-B.	0.576
N301_00331	N301_01650	A0A0A0ARP8	A0A0A0B4U2	Microtubule-associated proteins 1A/1B light chain 3B.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.827
N301_00331	N301_04928	A0A0A0ARP8	A0A0A0B116	Microtubule-associated proteins 1A/1B light chain 3B.	FUN14 domain-containing protein 1.	0.901
N301_00331	N301_07768	A0A0A0ARP8	A0A0A0A2M0	Microtubule-associated proteins 1A/1B light chain 3B.	Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.654
N301_00331	N301_07873	A0A0A0ARP8	A0A0A0ADK7	Microtubule-associated proteins 1A/1B light chain 3B.	Gamma-secretase-activating protein.	0.889
N301_00331	N301_08389	A0A0A0ARP8	A0A0A0A481	Microtubule-associated proteins 1A/1B light chain 3B.	Polyubiquitin-C.	0.685
N301_00331	N301_09260	A0A0A0ARP8	A0A0A0A1V2	Microtubule-associated proteins 1A/1B light chain 3B.	Voltage-dependent anion-selective channel protein 1.	0.614
N301_00331	N301_10046	A0A0A0ARP8	A0A0A0AZL1	Microtubule-associated proteins 1A/1B light chain 3B.	Microtubule-associated proteins 1A/1B light chain 3A.	0.826
N301_00331	N301_11302	A0A0A0ARP8	A0A0A0A8D0	Microtubule-associated proteins 1A/1B light chain 3B.	FUN14 domain-containing protein 2.	0.833
N301_00331	N301_11334	A0A0A0ARP8	A0A0A0ASF1	Microtubule-associated proteins 1A/1B light chain 3B.	Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.669
N301_00331	N301_12169	A0A0A0ARP8	A0A0A0AZD3	Microtubule-associated proteins 1A/1B light chain 3B.	Sequestosome-1.	0.931
N301_00331	N301_15403	A0A0A0ARP8	A0A0A0AEH7	Microtubule-associated proteins 1A/1B light chain 3B.	Serine/threonine-protein kinase ULK2.	0.876
N301_00331	N301_15418	A0A0A0ARP8	A0A0A0AEJ7	Microtubule-associated proteins 1A/1B light chain 3B.	Polyubiquitin-B.	0.685
N301_00331	N301_15775	A0A0A0ARP8	A0A0A0AUK4	Microtubule-associated proteins 1A/1B light chain 3B.	Protein kinase domain-containing protein.	0.434
N301_00431	N301_04928	A0A0A0ALH4	A0A0A0B116	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	FUN14 domain-containing protein 1.	0.766