STRINGSTRING
N301_10038 N301_10038 N301_02692 N301_02692 N301_11472 N301_11472 N301_06639 N301_06639 N301_03047 N301_03047 N301_06462 N301_06462 N301_06464 N301_06464 N301_02261 N301_02261 N301_16576 N301_16576 N301_05068 N301_05068 N301_09492 N301_09492 N301_06460 N301_06460 N301_09248 N301_09248 N301_14862 N301_14862 N301_07156 N301_07156 N301_13874 N301_13874 N301_00829 N301_00829 N301_01032 N301_01032
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_10038Charged multivesicular body protein 4b. (179 aa)
N301_02692Charged multivesicular body protein 4c. (162 aa)
N301_11472Interferon regulatory factor 2. (350 aa)
N301_06639Bcl-2 homologous antagonist/killer. (188 aa)
N301_03047Cytochrome c, somatic; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (106 aa)
N301_06462Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (107 aa)
N301_06464Non-syndromic hearing impairment protein 5. (499 aa)
N301_02261Interleukin-18. (190 aa)
N301_16576High mobility group protein B1. (215 aa)
N301_05068Charged multivesicular body protein 3. (203 aa)
N301_09492Charged multivesicular body protein 7. (353 aa)
N301_06460Gonadotropin inhibitory hormone peptides. (173 aa)
N301_09248Interferon regulatory factor. (314 aa)
N301_14862Charged multivesicular body protein 2a. (159 aa)
N301_07156Charged multivesicular body protein 2b. (203 aa)
N301_13874Caspase-1; Belongs to the peptidase C14A family. (388 aa)
N301_00829Caspase-3; Belongs to the peptidase C14A family. (242 aa)
N301_01032Charged multivesicular body protein 6. (142 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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