STRINGSTRING
N301_10272 N301_10272 N301_11907 N301_11907 N301_08939 N301_08939 N301_08940 N301_08940 N301_02994 N301_02994 N301_06708 N301_06708 N301_01348 N301_01348 N301_10817 N301_10817 N301_01983 N301_01983 N301_07135 N301_07135 N301_05780 N301_05780 N301_05310 N301_05310 N301_01772 N301_01772 N301_12279 N301_12279 N301_05205 N301_05205 N301_12366 N301_12366 N301_04126 N301_04126 N301_14942 N301_14942 N301_14941 N301_14941 N301_08609 N301_08609 N301_15371 N301_15371 N301_06549 N301_06549 N301_00100 N301_00100 N301_13824 N301_13824 N301_08445 N301_08445 N301_16152 N301_16152 N301_07702 N301_07702 N301_04659 N301_04659 N301_06759 N301_06759 N301_04864 N301_04864 N301_10902 N301_10902 N301_11491 N301_11491 N301_12809 N301_12809 N301_00246 N301_00246 N301_11940 N301_11940 N301_13559 N301_13559 N301_07749 N301_07749 N301_14067 N301_14067 N301_09246 N301_09246 N301_04556 N301_04556 N301_07662 N301_07662 N301_11018 N301_11018 N301_00449 N301_00449
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_10272RecQ-mediated genome instability protein 1. (627 aa)
N301_11907Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (497 aa)
N301_08939Ankyrin repeat domain-containing protein 11. (781 aa)
N301_08940Ankyrin repeat domain-containing protein 11. (1093 aa)
N301_02994Replication factor C subunit 3. (327 aa)
N301_06708DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (998 aa)
N301_01348RecQ-mediated genome instability protein 2. (49 aa)
N301_10817DNA endonuclease RBBP8. (908 aa)
N301_01983BRCA1-associated RING domain protein 1. (722 aa)
N301_07135Tudor domain-containing protein 3. (726 aa)
N301_05780Cell cycle checkpoint protein RAD17. (680 aa)
N301_05310Tyrosine-protein kinase. (1099 aa)
N301_01772Replication factor C subunit 5. (284 aa)
N301_12279Replication factor C subunit 2. (316 aa)
N301_05205Werner syndrome ATP-dependent helicase. (1364 aa)
N301_12366Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (602 aa)
N301_04126Putative ankyrin repeat domain-containing protein 31. (723 aa)
N301_14942Ankyrin repeat domain-containing protein 32. (215 aa)
N301_14941Ankyrin repeat domain-containing protein 32. (422 aa)
N301_08609Exonuclease 3'-5' domain-containing protein 2. (621 aa)
N301_15371Fanconi anemia group J protein. (1261 aa)
N301_06549RCC1 and BTB domain-containing protein 1. (531 aa)
N301_00100Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family. (700 aa)
N301_13824Uncharacterized protein. (1287 aa)
N301_08445Cell cycle checkpoint control protein RAD9B. (401 aa)
N301_16152DNA repair protein RAD52. (420 aa)
N301_07702Replication protein A 14 kDa subunit. (82 aa)
N301_04659Uncharacterized protein. (127 aa)
N301_06759RNA-directed DNA polymerase from mobile element jockey. (110 aa)
N301_04864Ankyrin repeat domain-containing protein 12. (1916 aa)
N301_10902Cell cycle checkpoint protein RAD1. (219 aa)
N301_11491RCC1 and BTB domain-containing protein 2. (531 aa)
N301_12809RAD9, HUS1, RAD1-interacting nuclear orphan protein 1. (243 aa)
N301_00246Checkpoint protein HUS1. (266 aa)
N301_11940DNA topoisomerase 2-binding protein 1. (504 aa)
N301_13559DNA replication ATP-dependent helicase/nuclease DNA2. (1004 aa)
N301_07749Replication factor C subunit 4. (362 aa)
N301_14067Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2667 aa)
N301_09246DNA repair protein RAD50. (1312 aa)
N301_04556Cell cycle checkpoint control protein RAD9A. (160 aa)
N301_07662Exonuclease 1. (802 aa)
N301_11018Replication protein A 32 kDa subunit. (232 aa)
N301_00449DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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