STRINGSTRING
N301_06402 N301_06402 FEN1 FEN1 N301_10817 N301_10817 N301_12329 N301_12329 N301_05099 N301_05099 N301_00100 N301_00100 N301_16152 N301_16152 N301_09246 N301_09246
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N301_06402Poly [ADP-ribose] polymerase 1. (94 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (382 aa)
N301_10817DNA endonuclease RBBP8. (908 aa)
N301_12329DNA ligase. (949 aa)
N301_05099DNA polymerase nu. (640 aa)
N301_00100Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family. (700 aa)
N301_16152DNA repair protein RAD52. (420 aa)
N301_09246DNA repair protein RAD50. (1312 aa)
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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